Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Chrna4O70174 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chrna4O70174 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chrna4O70174 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chrna4O70174 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Chrna4O70174 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chrna4O70174 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Chrna4O70174 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Chrna4O70174 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chrna4O70174 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chrna4O70174 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Chrna4O70174 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Chrna4O70174 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chrna4O70174 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chrna4O70174 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chrna4O70174 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Chrna4O70174 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Chrna4O70174 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chrna4O70174 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Chrna4O70174 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Chrna4O70174 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Chrna4O70174 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Chrna4O70174 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
Chrna4O70174 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Chrna4O70174 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Chrna4O70174 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Chrna4O70174 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Chrna4O70174 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Chrna4O70174 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Chrna4O70174 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.77□□□□□ -0.52
Chrna4O70174 Gm45199-201ENSMUST00000207640 1507 ntBASIC11.77□□□□□ -0.52
Chrna4O70174 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chrna4O70174 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chrna4O70174 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chrna4O70174 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Chrna4O70174 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chrna4O70174 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.53
Chrna4O70174 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Chrna4O70174 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC11.77□□□□□ -0.53
Chrna4O70174 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chrna4O70174 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chrna4O70174 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC11.77□□□□□ -0.53
Chrna4O70174 Gm11783-201ENSMUST00000119549 885 ntBASIC11.77□□□□□ -0.53
Chrna4O70174 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Chrna4O70174 Gm18734-201ENSMUST00000172937 808 ntBASIC11.77□□□□□ -0.53
Chrna4O70174 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.77□□□□□ -0.53
Chrna4O70174 Gm2965-201ENSMUST00000198365 343 ntBASIC11.77□□□□□ -0.53
Chrna4O70174 AU022133-201ENSMUST00000200601 873 ntBASIC11.77□□□□□ -0.53
Chrna4O70174 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Chrna4O70174 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chrna4O70174 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC11.77□□□□□ -0.53
Chrna4O70174 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chrna4O70174 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chrna4O70174 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chrna4O70174 Gm10288-201ENSMUST00000084614 537 ntBASIC11.77□□□□□ -0.53
Chrna4O70174 Gm37931-201ENSMUST00000194686 2866 ntBASIC11.77□□□□□ -0.53
Chrna4O70174 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Chrna4O70174 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chrna4O70174 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chrna4O70174 AC159308.2-201ENSMUST00000213592 2325 ntBASIC11.77□□□□□ -0.53
Chrna4O70174 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chrna4O70174 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Chrna4O70174 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chrna4O70174 Gm7993-201ENSMUST00000200970 1384 ntBASIC11.77□□□□□ -0.53
Chrna4O70174 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chrna4O70174 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.77□□□□□ -0.53
Chrna4O70174 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Chrna4O70174 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chrna4O70174 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chrna4O70174 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chrna4O70174 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Chrna4O70174 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Chrna4O70174 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chrna4O70174 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chrna4O70174 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chrna4O70174 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chrna4O70174 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Chrna4O70174 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.76□□□□□ -0.53
Chrna4O70174 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chrna4O70174 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chrna4O70174 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Chrna4O70174 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Chrna4O70174 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chrna4O70174 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Chrna4O70174 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Chrna4O70174 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chrna4O70174 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.76□□□□□ -0.53
Chrna4O70174 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Chrna4O70174 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Chrna4O70174 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Chrna4O70174 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
Chrna4O70174 Gm12217-201ENSMUST00000118858 696 ntBASIC11.76□□□□□ -0.53
Chrna4O70174 Gm8199-201ENSMUST00000121323 823 ntBASIC11.76□□□□□ -0.53
Chrna4O70174 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chrna4O70174 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
Chrna4O70174 Gm8815-201ENSMUST00000173809 620 ntBASIC11.76□□□□□ -0.53
Chrna4O70174 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Chrna4O70174 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Chrna4O70174 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
Chrna4O70174 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms