Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trdmt1O55055 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trdmt1O55055 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trdmt1O55055 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trdmt1O55055 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trdmt1O55055 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trdmt1O55055 Gm14071-201ENSMUST00000117817 509 ntBASIC12.86□□□□□ -0.35
Trdmt1O55055 Gm12783-201ENSMUST00000121425 397 ntBASIC12.86□□□□□ -0.35
Trdmt1O55055 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC12.86□□□□□ -0.35
Trdmt1O55055 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trdmt1O55055 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC12.86□□□□□ -0.35
Trdmt1O55055 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trdmt1O55055 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trdmt1O55055 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC12.86□□□□□ -0.35
Trdmt1O55055 Gm19587-201ENSMUST00000191395 545 ntBASIC12.86□□□□□ -0.35
Trdmt1O55055 Gm18463-201ENSMUST00000207258 474 ntBASIC12.86□□□□□ -0.35
Trdmt1O55055 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trdmt1O55055 Gm18460-201ENSMUST00000208088 464 ntBASIC12.86□□□□□ -0.35
Trdmt1O55055 Gm7082-201ENSMUST00000209880 969 ntBASIC12.86□□□□□ -0.35
Trdmt1O55055 AC168279.1-201ENSMUST00000214611 382 ntBASIC12.86□□□□□ -0.35
Trdmt1O55055 AC164618.2-201ENSMUST00000224770 573 ntBASIC12.86□□□□□ -0.35
Trdmt1O55055 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trdmt1O55055 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trdmt1O55055 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Trdmt1O55055 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Trdmt1O55055 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trdmt1O55055 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trdmt1O55055 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trdmt1O55055 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trdmt1O55055 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trdmt1O55055 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trdmt1O55055 Gm21759-201ENSMUST00000178345 1828 ntBASIC12.85□□□□□ -0.35
Trdmt1O55055 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trdmt1O55055 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trdmt1O55055 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trdmt1O55055 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trdmt1O55055 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trdmt1O55055 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trdmt1O55055 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.85□□□□□ -0.35
Trdmt1O55055 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trdmt1O55055 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trdmt1O55055 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trdmt1O55055 Gm11500-201ENSMUST00000118237 601 ntBASIC12.85□□□□□ -0.35
Trdmt1O55055 Gm9673-201ENSMUST00000119287 781 ntBASIC12.85□□□□□ -0.35
Trdmt1O55055 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trdmt1O55055 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trdmt1O55055 Gm23694-201ENSMUST00000179335 110 ntBASIC12.85□□□□□ -0.35
Trdmt1O55055 Gm37284-201ENSMUST00000193607 539 ntBASIC12.85□□□□□ -0.35
Trdmt1O55055 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC12.85□□□□□ -0.35
Trdmt1O55055 Gm18065-201ENSMUST00000221395 526 ntBASIC12.85□□□□□ -0.35
Trdmt1O55055 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trdmt1O55055 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Trdmt1O55055 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Trdmt1O55055 AC154572.1-201ENSMUST00000226098 1204 ntBASIC12.85□□□□□ -0.35
Trdmt1O55055 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trdmt1O55055 Gm8325-201ENSMUST00000099086 453 ntBASIC12.85□□□□□ -0.35
Trdmt1O55055 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trdmt1O55055 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.85□□□□□ -0.35
Trdmt1O55055 Gm44056-201ENSMUST00000204623 1427 ntBASIC12.85□□□□□ -0.35
Trdmt1O55055 Gm44190-201ENSMUST00000205083 1401 ntBASIC12.85□□□□□ -0.35
Trdmt1O55055 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trdmt1O55055 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.85□□□□□ -0.35
Trdmt1O55055 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trdmt1O55055 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trdmt1O55055 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trdmt1O55055 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trdmt1O55055 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trdmt1O55055 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trdmt1O55055 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trdmt1O55055 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trdmt1O55055 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trdmt1O55055 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trdmt1O55055 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trdmt1O55055 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC12.85□□□□□ -0.35
Trdmt1O55055 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trdmt1O55055 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trdmt1O55055 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trdmt1O55055 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trdmt1O55055 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trdmt1O55055 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC12.84□□□□□ -0.35
Trdmt1O55055 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trdmt1O55055 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trdmt1O55055 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trdmt1O55055 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trdmt1O55055 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trdmt1O55055 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trdmt1O55055 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trdmt1O55055 Gm25053-201ENSMUST00000103982 133 ntBASIC12.84□□□□□ -0.35
Trdmt1O55055 Gm25922-201ENSMUST00000104281 130 ntBASIC12.84□□□□□ -0.35
Trdmt1O55055 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trdmt1O55055 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trdmt1O55055 Gm13047-201ENSMUST00000117116 815 ntBASIC12.84□□□□□ -0.35
Trdmt1O55055 Gm12194-201ENSMUST00000117756 1012 ntBASIC12.84□□□□□ -0.35
Trdmt1O55055 Gm12816-201ENSMUST00000118069 1212 ntBASIC12.84□□□□□ -0.35
Trdmt1O55055 Gm13351-201ENSMUST00000118087 414 ntBASIC12.84□□□□□ -0.35
Trdmt1O55055 Gm24679-201ENSMUST00000158762 111 ntBASIC12.84□□□□□ -0.35
Trdmt1O55055 AC238811.4-201ENSMUST00000178019 1246 ntBASIC12.84□□□□□ -0.35
Trdmt1O55055 AC238940.3-201ENSMUST00000178830 1246 ntBASIC12.84□□□□□ -0.35
Trdmt1O55055 Gm4895-201ENSMUST00000181646 1137 ntBASIC12.84□□□□□ -0.35
Trdmt1O55055 Gm26982-201ENSMUST00000182250 1151 ntBASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms