Protein–RNA interactions for Protein: E9PVD3

Dchs1, Protocadherin-16, mousemouse

Predictions only

Length 3,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dchs1E9PVD3 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Dchs1E9PVD3 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Dchs1E9PVD3 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Dchs1E9PVD3 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Dchs1E9PVD3 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Dchs1E9PVD3 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC10.06□□□□□ -0.8
Dchs1E9PVD3 St8sia3os-204ENSMUST00000140903 383 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Dchs1E9PVD3 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC10.06□□□□□ -0.8
Dchs1E9PVD3 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Dchs1E9PVD3 Gm26174-201ENSMUST00000158415 219 ntBASIC10.06□□□□□ -0.8
Dchs1E9PVD3 Tnnc1-202ENSMUST00000169169 721 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Dchs1E9PVD3 Cd9-ps-201ENSMUST00000174687 650 ntBASIC10.06□□□□□ -0.8
Dchs1E9PVD3 Erg-208ENSMUST00000176345 1222 ntTSL 5 BASIC10.06□□□□□ -0.8
Dchs1E9PVD3 Gm21577-201ENSMUST00000190823 697 ntBASIC10.06□□□□□ -0.8
Dchs1E9PVD3 Gm20802-201ENSMUST00000190832 698 ntBASIC10.06□□□□□ -0.8
Dchs1E9PVD3 Gm42375-201ENSMUST00000206226 745 ntTSL 5 BASIC10.06□□□□□ -0.8
Dchs1E9PVD3 Gm5040-201ENSMUST00000218609 800 ntBASIC10.06□□□□□ -0.8
Dchs1E9PVD3 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Dchs1E9PVD3 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Dchs1E9PVD3 Olfr1313-201ENSMUST00000099599 938 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Dchs1E9PVD3 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Dchs1E9PVD3 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Dchs1E9PVD3 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Dchs1E9PVD3 AC122811.1-201ENSMUST00000222257 2921 ntBASIC10.06□□□□□ -0.8
Dchs1E9PVD3 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC10.06□□□□□ -0.8
Dchs1E9PVD3 A430018G15Rik-201ENSMUST00000124210 1314 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Dchs1E9PVD3 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Dchs1E9PVD3 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Dchs1E9PVD3 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Dchs1E9PVD3 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Dchs1E9PVD3 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Dchs1E9PVD3 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Dchs1E9PVD3 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Dchs1E9PVD3 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC10.06□□□□□ -0.8
Dchs1E9PVD3 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC10.06□□□□□ -0.8
Dchs1E9PVD3 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Dchs1E9PVD3 AC155709.2-201ENSMUST00000219360 678 ntTSL 3 BASIC10.06□□□□□ -0.8
Dchs1E9PVD3 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Dchs1E9PVD3 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Dchs1E9PVD3 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Dchs1E9PVD3 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Dchs1E9PVD3 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Dchs1E9PVD3 Gpr75-201ENSMUST00000109430 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Dchs1E9PVD3 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Dchs1E9PVD3 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Dchs1E9PVD3 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Dchs1E9PVD3 Mrps36-203ENSMUST00000109333 701 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Dchs1E9PVD3 Gm12247-201ENSMUST00000117585 670 ntBASIC10.06□□□□□ -0.8
Dchs1E9PVD3 Gm15136-201ENSMUST00000120552 533 ntBASIC10.06□□□□□ -0.8
Dchs1E9PVD3 Gm9630-201ENSMUST00000178304 885 ntBASIC10.06□□□□□ -0.8
Dchs1E9PVD3 Gm7572-201ENSMUST00000182616 766 ntBASIC10.06□□□□□ -0.8
Dchs1E9PVD3 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Dchs1E9PVD3 Olfr1335-202ENSMUST00000219094 1148 ntAPPRIS P2 BASIC10.06□□□□□ -0.8
Dchs1E9PVD3 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Dchs1E9PVD3 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Dchs1E9PVD3 Olfr1335-201ENSMUST00000084313 1148 ntAPPRIS ALT2 BASIC10.06□□□□□ -0.8
Dchs1E9PVD3 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Dchs1E9PVD3 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Dchs1E9PVD3 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Dchs1E9PVD3 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Dchs1E9PVD3 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Dchs1E9PVD3 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Dchs1E9PVD3 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Dchs1E9PVD3 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Dchs1E9PVD3 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Dchs1E9PVD3 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Dchs1E9PVD3 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Dchs1E9PVD3 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Dchs1E9PVD3 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC10.05□□□□□ -0.8
Dchs1E9PVD3 Ighv1-62-3-201ENSMUST00000103532 405 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Dchs1E9PVD3 Glrx2-206ENSMUST00000145969 924 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Dchs1E9PVD3 Gm7741-201ENSMUST00000181445 989 ntBASIC10.05□□□□□ -0.8
Dchs1E9PVD3 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Dchs1E9PVD3 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Dchs1E9PVD3 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Dchs1E9PVD3 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Dchs1E9PVD3 Gm5740-201ENSMUST00000211003 1857 ntBASIC10.05□□□□□ -0.8
Dchs1E9PVD3 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Dchs1E9PVD3 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Dchs1E9PVD3 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Dchs1E9PVD3 Slc6a12-201ENSMUST00000032200 2644 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Dchs1E9PVD3 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Dchs1E9PVD3 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Dchs1E9PVD3 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Dchs1E9PVD3 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Dchs1E9PVD3 Ighv1-56-201ENSMUST00000103527 294 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Dchs1E9PVD3 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Dchs1E9PVD3 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC10.05□□□□□ -0.8
Dchs1E9PVD3 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Dchs1E9PVD3 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
Dchs1E9PVD3 Gm8111-201ENSMUST00000117659 987 ntBASIC10.05□□□□□ -0.8
Dchs1E9PVD3 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
Dchs1E9PVD3 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Dchs1E9PVD3 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC10.05□□□□□ -0.8
Dchs1E9PVD3 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Dchs1E9PVD3 Gm43106-201ENSMUST00000199485 637 ntBASIC10.05□□□□□ -0.8
Dchs1E9PVD3 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC10.05□□□□□ -0.8
Dchs1E9PVD3 Thy1-205ENSMUST00000215156 460 ntTSL 5 BASIC10.05□□□□□ -0.8
Dchs1E9PVD3 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Dchs1E9PVD3 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms