Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col4a6B1AVK5 Gm12912-201ENSMUST00000121596 1381 ntBASIC11.82□□□□□ -0.52
Col4a6B1AVK5 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC11.82□□□□□ -0.52
Col4a6B1AVK5 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC11.82□□□□□ -0.52
Col4a6B1AVK5 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col4a6B1AVK5 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Col4a6B1AVK5 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col4a6B1AVK5 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col4a6B1AVK5 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Col4a6B1AVK5 Gm15625-201ENSMUST00000117617 1093 ntBASIC11.82□□□□□ -0.52
Col4a6B1AVK5 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col4a6B1AVK5 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Col4a6B1AVK5 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Col4a6B1AVK5 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC11.82□□□□□ -0.52
Col4a6B1AVK5 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC11.82□□□□□ -0.52
Col4a6B1AVK5 Gm4753-201ENSMUST00000188327 1255 ntBASIC11.82□□□□□ -0.52
Col4a6B1AVK5 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC11.82□□□□□ -0.52
Col4a6B1AVK5 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Col4a6B1AVK5 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col4a6B1AVK5 Gm26782-203ENSMUST00000227103 751 ntBASIC11.82□□□□□ -0.52
Col4a6B1AVK5 AC156790.2-201ENSMUST00000227115 568 ntBASIC11.82□□□□□ -0.52
Col4a6B1AVK5 Gm9791-201ENSMUST00000060997 447 ntBASIC11.82□□□□□ -0.52
Col4a6B1AVK5 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col4a6B1AVK5 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col4a6B1AVK5 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Col4a6B1AVK5 Gm3836-201ENSMUST00000211377 1613 ntBASIC11.82□□□□□ -0.52
Col4a6B1AVK5 Olfr160-202ENSMUST00000211952 3492 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Col4a6B1AVK5 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.82□□□□□ -0.52
Col4a6B1AVK5 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col4a6B1AVK5 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Col4a6B1AVK5 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Col4a6B1AVK5 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col4a6B1AVK5 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col4a6B1AVK5 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col4a6B1AVK5 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC11.82□□□□□ -0.52
Col4a6B1AVK5 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col4a6B1AVK5 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col4a6B1AVK5 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.82□□□□□ -0.52
Col4a6B1AVK5 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col4a6B1AVK5 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC11.82□□□□□ -0.52
Col4a6B1AVK5 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Col4a6B1AVK5 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col4a6B1AVK5 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col4a6B1AVK5 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Col4a6B1AVK5 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Col4a6B1AVK5 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.81□□□□□ -0.52
Col4a6B1AVK5 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col4a6B1AVK5 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col4a6B1AVK5 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col4a6B1AVK5 Ighv5-8-202ENSMUST00000191967 337 ntBASIC11.81□□□□□ -0.52
Col4a6B1AVK5 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC11.81□□□□□ -0.52
Col4a6B1AVK5 Gm44605-201ENSMUST00000206892 949 ntBASIC11.81□□□□□ -0.52
Col4a6B1AVK5 Gm45481-201ENSMUST00000209717 877 ntBASIC11.81□□□□□ -0.52
Col4a6B1AVK5 Gm7192-201ENSMUST00000210793 1137 ntBASIC11.81□□□□□ -0.52
Col4a6B1AVK5 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Col4a6B1AVK5 Olfr1313-201ENSMUST00000099599 938 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Col4a6B1AVK5 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col4a6B1AVK5 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
Col4a6B1AVK5 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col4a6B1AVK5 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col4a6B1AVK5 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col4a6B1AVK5 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col4a6B1AVK5 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col4a6B1AVK5 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col4a6B1AVK5 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col4a6B1AVK5 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col4a6B1AVK5 Fam114a2-202ENSMUST00000108850 1765 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col4a6B1AVK5 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col4a6B1AVK5 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col4a6B1AVK5 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC11.81□□□□□ -0.52
Col4a6B1AVK5 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col4a6B1AVK5 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col4a6B1AVK5 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col4a6B1AVK5 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col4a6B1AVK5 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col4a6B1AVK5 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Col4a6B1AVK5 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col4a6B1AVK5 Gm14113-201ENSMUST00000121399 976 ntBASIC11.81□□□□□ -0.52
Col4a6B1AVK5 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Col4a6B1AVK5 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC11.81□□□□□ -0.52
Col4a6B1AVK5 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Col4a6B1AVK5 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC11.81□□□□□ -0.52
Col4a6B1AVK5 Gm7069-201ENSMUST00000182418 1008 ntBASIC11.81□□□□□ -0.52
Col4a6B1AVK5 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC11.81□□□□□ -0.52
Col4a6B1AVK5 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Col4a6B1AVK5 AC152169.1-201ENSMUST00000223901 701 ntBASIC11.81□□□□□ -0.52
Col4a6B1AVK5 AC137871.1-201ENSMUST00000228278 475 ntBASIC11.81□□□□□ -0.52
Col4a6B1AVK5 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col4a6B1AVK5 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Col4a6B1AVK5 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col4a6B1AVK5 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col4a6B1AVK5 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col4a6B1AVK5 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Col4a6B1AVK5 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col4a6B1AVK5 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col4a6B1AVK5 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col4a6B1AVK5 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col4a6B1AVK5 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col4a6B1AVK5 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col4a6B1AVK5 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms