Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Scn1aA2APX8 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scn1aA2APX8 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scn1aA2APX8 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scn1aA2APX8 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scn1aA2APX8 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.19□□□□□ -0.46
Scn1aA2APX8 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Scn1aA2APX8 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scn1aA2APX8 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Scn1aA2APX8 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scn1aA2APX8 Gm14585-201ENSMUST00000120713 634 ntBASIC12.19□□□□□ -0.46
Scn1aA2APX8 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC12.19□□□□□ -0.46
Scn1aA2APX8 Olfml3-204ENSMUST00000169286 874 ntBASIC12.19□□□□□ -0.46
Scn1aA2APX8 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC12.19□□□□□ -0.46
Scn1aA2APX8 Gm5342-201ENSMUST00000181982 1003 ntBASIC12.19□□□□□ -0.46
Scn1aA2APX8 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Scn1aA2APX8 Gm43852-201ENSMUST00000202098 917 ntBASIC12.19□□□□□ -0.46
Scn1aA2APX8 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Scn1aA2APX8 AC122891.1-201ENSMUST00000218671 268 ntBASIC12.19□□□□□ -0.46
Scn1aA2APX8 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Scn1aA2APX8 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.19□□□□□ -0.46
Scn1aA2APX8 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scn1aA2APX8 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scn1aA2APX8 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scn1aA2APX8 Gm37931-201ENSMUST00000194686 2866 ntBASIC12.19□□□□□ -0.46
Scn1aA2APX8 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Scn1aA2APX8 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Scn1aA2APX8 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scn1aA2APX8 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scn1aA2APX8 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scn1aA2APX8 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn1aA2APX8 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn1aA2APX8 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn1aA2APX8 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Scn1aA2APX8 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.18□□□□□ -0.46
Scn1aA2APX8 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Scn1aA2APX8 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC12.18□□□□□ -0.46
Scn1aA2APX8 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC12.18□□□□□ -0.46
Scn1aA2APX8 Gm23694-201ENSMUST00000179335 110 ntBASIC12.18□□□□□ -0.46
Scn1aA2APX8 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Scn1aA2APX8 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC12.18□□□□□ -0.46
Scn1aA2APX8 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Scn1aA2APX8 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn1aA2APX8 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn1aA2APX8 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Scn1aA2APX8 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn1aA2APX8 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn1aA2APX8 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn1aA2APX8 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Scn1aA2APX8 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn1aA2APX8 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn1aA2APX8 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn1aA2APX8 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Scn1aA2APX8 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Scn1aA2APX8 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn1aA2APX8 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn1aA2APX8 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Scn1aA2APX8 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn1aA2APX8 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn1aA2APX8 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Scn1aA2APX8 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Scn1aA2APX8 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Scn1aA2APX8 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Scn1aA2APX8 Gm7741-201ENSMUST00000181445 989 ntBASIC12.18□□□□□ -0.46
Scn1aA2APX8 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC12.18□□□□□ -0.46
Scn1aA2APX8 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC12.18□□□□□ -0.46
Scn1aA2APX8 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn1aA2APX8 AC141438.2-201ENSMUST00000215068 271 ntBASIC12.18□□□□□ -0.46
Scn1aA2APX8 AC135114.1-201ENSMUST00000228682 270 ntBASIC12.18□□□□□ -0.46
Scn1aA2APX8 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn1aA2APX8 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn1aA2APX8 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC12.18□□□□□ -0.46
Scn1aA2APX8 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn1aA2APX8 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Scn1aA2APX8 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn1aA2APX8 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn1aA2APX8 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Scn1aA2APX8 Btrc-209ENSMUST00000224478 2194 ntBASIC12.17□□□□□ -0.46
Scn1aA2APX8 CT010447.1-201ENSMUST00000225657 1608 ntBASIC12.17□□□□□ -0.46
Scn1aA2APX8 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Scn1aA2APX8 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn1aA2APX8 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn1aA2APX8 Gm11451-201ENSMUST00000118946 630 ntBASIC12.17□□□□□ -0.46
Scn1aA2APX8 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Scn1aA2APX8 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Scn1aA2APX8 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Scn1aA2APX8 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC12.17□□□□□ -0.46
Scn1aA2APX8 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn1aA2APX8 Gm10752-201ENSMUST00000218348 729 ntBASIC12.17□□□□□ -0.46
Scn1aA2APX8 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC12.17□□□□□ -0.46
Scn1aA2APX8 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn1aA2APX8 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn1aA2APX8 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn1aA2APX8 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn1aA2APX8 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.17□□□□□ -0.46
Scn1aA2APX8 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn1aA2APX8 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn1aA2APX8 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC12.17□□□□□ -0.46
Scn1aA2APX8 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn1aA2APX8 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms