Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Trav8-1A0A075B641 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Trav8-1A0A075B641 Gramd1b-212ENSMUST00000165104 3824 ntAPPRIS P2 TSL 5 BASIC8.34□□□□□ -1.07
Trav8-1A0A075B641 Lingo1-206ENSMUST00000210032 3627 ntTSL 5 BASIC8.34□□□□□ -1.07
Trav8-1A0A075B641 Abcg1-201ENSMUST00000024829 3610 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trav8-1A0A075B641 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trav8-1A0A075B641 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trav8-1A0A075B641 Zfp324-201ENSMUST00000038701 4315 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trav8-1A0A075B641 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Trav8-1A0A075B641 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Trav8-1A0A075B641 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trav8-1A0A075B641 Gpr35-202ENSMUST00000064480 3409 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trav8-1A0A075B641 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Trav8-1A0A075B641 Bmpr2-201ENSMUST00000087435 12899 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trav8-1A0A075B641 Med12l-206ENSMUST00000199659 11006 ntAPPRIS P2 TSL 5 BASIC8.34□□□□□ -1.07
Trav8-1A0A075B641 Gm5884-201ENSMUST00000036712 1479 ntBASIC8.34□□□□□ -1.07
Trav8-1A0A075B641 Wdr60-201ENSMUST00000039349 3721 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trav8-1A0A075B641 Cacna1d-204ENSMUST00000223803 6435 ntAPPRIS ALT2 BASIC8.34□□□□□ -1.07
Trav8-1A0A075B641 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trav8-1A0A075B641 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC8.34□□□□□ -1.07
Trav8-1A0A075B641 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trav8-1A0A075B641 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trav8-1A0A075B641 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC8.34□□□□□ -1.07
Trav8-1A0A075B641 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trav8-1A0A075B641 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Trav8-1A0A075B641 Gm8805-201ENSMUST00000117848 313 ntBASIC8.34□□□□□ -1.07
Trav8-1A0A075B641 Gm12036-201ENSMUST00000120008 530 ntBASIC8.34□□□□□ -1.07
Trav8-1A0A075B641 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Trav8-1A0A075B641 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC8.34□□□□□ -1.07
Trav8-1A0A075B641 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Trav8-1A0A075B641 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC8.34□□□□□ -1.07
Trav8-1A0A075B641 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Trav8-1A0A075B641 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC8.34□□□□□ -1.07
Trav8-1A0A075B641 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC8.34□□□□□ -1.07
Trav8-1A0A075B641 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC8.34□□□□□ -1.07
Trav8-1A0A075B641 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Trav8-1A0A075B641 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trav8-1A0A075B641 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC8.34□□□□□ -1.07
Trav8-1A0A075B641 Gm5276-201ENSMUST00000196683 1047 ntBASIC8.34□□□□□ -1.07
Trav8-1A0A075B641 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC8.34□□□□□ -1.07
Trav8-1A0A075B641 Gm42929-201ENSMUST00000198374 1286 ntBASIC8.34□□□□□ -1.07
Trav8-1A0A075B641 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC8.34□□□□□ -1.07
Trav8-1A0A075B641 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC8.34□□□□□ -1.07
Trav8-1A0A075B641 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC8.34□□□□□ -1.07
Trav8-1A0A075B641 Gm18165-201ENSMUST00000217426 928 ntBASIC8.34□□□□□ -1.07
Trav8-1A0A075B641 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Trav8-1A0A075B641 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Trav8-1A0A075B641 Gm20715-201ENSMUST00000054781 4460 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
Trav8-1A0A075B641 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
Trav8-1A0A075B641 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Trav8-1A0A075B641 Sall2-201ENSMUST00000058326 5147 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trav8-1A0A075B641 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Trav8-1A0A075B641 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trav8-1A0A075B641 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trav8-1A0A075B641 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trav8-1A0A075B641 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trav8-1A0A075B641 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Trav8-1A0A075B641 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trav8-1A0A075B641 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC8.34□□□□□ -1.07
Trav8-1A0A075B641 Qars-203ENSMUST00000134939 2374 ntTSL 5 BASIC8.34□□□□□ -1.07
Trav8-1A0A075B641 St5-203ENSMUST00000084738 3161 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Trav8-1A0A075B641 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trav8-1A0A075B641 Lrsam1-201ENSMUST00000028132 3981 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trav8-1A0A075B641 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trav8-1A0A075B641 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.08
Trav8-1A0A075B641 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.08
Trav8-1A0A075B641 Gm7598-201ENSMUST00000130251 3123 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
Trav8-1A0A075B641 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
Trav8-1A0A075B641 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav8-1A0A075B641 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trav8-1A0A075B641 Gm43823-201ENSMUST00000197391 1808 ntBASIC8.33□□□□□ -1.08
Trav8-1A0A075B641 Loxl4-201ENSMUST00000026190 3738 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav8-1A0A075B641 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trav8-1A0A075B641 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trav8-1A0A075B641 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav8-1A0A075B641 Cacna1c-202ENSMUST00000078320 8062 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav8-1A0A075B641 Capn8-201ENSMUST00000048941 2406 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav8-1A0A075B641 Gm16478-201ENSMUST00000208113 5084 ntBASIC8.33□□□□□ -1.08
Trav8-1A0A075B641 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav8-1A0A075B641 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav8-1A0A075B641 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav8-1A0A075B641 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Trav8-1A0A075B641 Bcl2l11-205ENSMUST00000110341 5036 ntAPPRIS P4 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav8-1A0A075B641 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trav8-1A0A075B641 Svil-204ENSMUST00000127297 6243 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Trav8-1A0A075B641 Gm37806-201ENSMUST00000194524 6387 ntBASIC8.33□□□□□ -1.08
Trav8-1A0A075B641 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav8-1A0A075B641 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav8-1A0A075B641 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Trav8-1A0A075B641 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav8-1A0A075B641 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trav8-1A0A075B641 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav8-1A0A075B641 Gm11618-201ENSMUST00000117946 267 ntBASIC8.33□□□□□ -1.08
Trav8-1A0A075B641 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC8.33□□□□□ -1.08
Trav8-1A0A075B641 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trav8-1A0A075B641 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC8.33□□□□□ -1.08
Trav8-1A0A075B641 Gm17208-201ENSMUST00000168388 535 ntBASIC8.33□□□□□ -1.08
Trav8-1A0A075B641 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC8.33□□□□□ -1.08
Trav8-1A0A075B641 Mir7654-201ENSMUST00000185082 70 ntBASIC8.33□□□□□ -1.08
Trav8-1A0A075B641 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC8.33□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 95.8 ms