Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
H2afb3S4R1G7 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
H2afb3S4R1G7 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC10.56□□□□□ -0.72
H2afb3S4R1G7 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
H2afb3S4R1G7 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
H2afb3S4R1G7 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
H2afb3S4R1G7 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
H2afb3S4R1G7 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC10.56□□□□□ -0.72
H2afb3S4R1G7 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
H2afb3S4R1G7 AC124397.2-201ENSMUST00000225575 2215 ntBASIC10.56□□□□□ -0.72
H2afb3S4R1G7 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC10.56□□□□□ -0.72
H2afb3S4R1G7 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
H2afb3S4R1G7 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
H2afb3S4R1G7 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC10.55□□□□□ -0.72
H2afb3S4R1G7 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
H2afb3S4R1G7 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
H2afb3S4R1G7 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC10.55□□□□□ -0.72
H2afb3S4R1G7 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
H2afb3S4R1G7 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
H2afb3S4R1G7 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
H2afb3S4R1G7 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
H2afb3S4R1G7 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
H2afb3S4R1G7 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
H2afb3S4R1G7 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
H2afb3S4R1G7 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
H2afb3S4R1G7 Gm43242-201ENSMUST00000199507 1776 ntBASIC10.55□□□□□ -0.72
H2afb3S4R1G7 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
H2afb3S4R1G7 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
H2afb3S4R1G7 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
H2afb3S4R1G7 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
H2afb3S4R1G7 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
H2afb3S4R1G7 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
H2afb3S4R1G7 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
H2afb3S4R1G7 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
H2afb3S4R1G7 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
H2afb3S4R1G7 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
H2afb3S4R1G7 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
H2afb3S4R1G7 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
H2afb3S4R1G7 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
H2afb3S4R1G7 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC10.55□□□□□ -0.72
H2afb3S4R1G7 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
H2afb3S4R1G7 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC10.55□□□□□ -0.72
H2afb3S4R1G7 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC10.55□□□□□ -0.72
H2afb3S4R1G7 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
H2afb3S4R1G7 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
H2afb3S4R1G7 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
H2afb3S4R1G7 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC10.55□□□□□ -0.72
H2afb3S4R1G7 Gm19187-201ENSMUST00000206781 892 ntBASIC10.55□□□□□ -0.72
H2afb3S4R1G7 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC10.55□□□□□ -0.72
H2afb3S4R1G7 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC10.55□□□□□ -0.72
H2afb3S4R1G7 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
H2afb3S4R1G7 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
H2afb3S4R1G7 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
H2afb3S4R1G7 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
H2afb3S4R1G7 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
H2afb3S4R1G7 AC107453.4-201ENSMUST00000227068 1817 ntBASIC10.55□□□□□ -0.72
H2afb3S4R1G7 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
H2afb3S4R1G7 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC10.55□□□□□ -0.72
H2afb3S4R1G7 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
H2afb3S4R1G7 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
H2afb3S4R1G7 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
H2afb3S4R1G7 AC131068.2-201ENSMUST00000226175 1453 ntBASIC10.55□□□□□ -0.72
H2afb3S4R1G7 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
H2afb3S4R1G7 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
H2afb3S4R1G7 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
H2afb3S4R1G7 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
H2afb3S4R1G7 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
H2afb3S4R1G7 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
H2afb3S4R1G7 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
H2afb3S4R1G7 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
H2afb3S4R1G7 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC10.54□□□□□ -0.72
H2afb3S4R1G7 AC091458.1-201ENSMUST00000220902 1361 ntBASIC10.54□□□□□ -0.72
H2afb3S4R1G7 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
H2afb3S4R1G7 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
H2afb3S4R1G7 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
H2afb3S4R1G7 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
H2afb3S4R1G7 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
H2afb3S4R1G7 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
H2afb3S4R1G7 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
H2afb3S4R1G7 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
H2afb3S4R1G7 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
H2afb3S4R1G7 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
H2afb3S4R1G7 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
H2afb3S4R1G7 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
H2afb3S4R1G7 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
H2afb3S4R1G7 Gm14726-201ENSMUST00000120623 896 ntBASIC10.54□□□□□ -0.72
H2afb3S4R1G7 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC10.54□□□□□ -0.72
H2afb3S4R1G7 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
H2afb3S4R1G7 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC10.54□□□□□ -0.72
H2afb3S4R1G7 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
H2afb3S4R1G7 Gm5847-201ENSMUST00000178959 1595 ntBASIC10.54□□□□□ -0.72
H2afb3S4R1G7 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC10.54□□□□□ -0.72
H2afb3S4R1G7 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
H2afb3S4R1G7 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC10.54□□□□□ -0.72
H2afb3S4R1G7 Gm19287-201ENSMUST00000203190 358 ntBASIC10.54□□□□□ -0.72
H2afb3S4R1G7 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC10.54□□□□□ -0.72
H2afb3S4R1G7 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC10.54□□□□□ -0.72
H2afb3S4R1G7 CT025533.2-201ENSMUST00000228715 1248 ntBASIC10.54□□□□□ -0.72
H2afb3S4R1G7 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
H2afb3S4R1G7 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms