Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Scn8aQ9WTU3 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scn8aQ9WTU3 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC11.72□□□□□ -0.53
Scn8aQ9WTU3 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scn8aQ9WTU3 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scn8aQ9WTU3 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scn8aQ9WTU3 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scn8aQ9WTU3 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scn8aQ9WTU3 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Scn8aQ9WTU3 Gm5171-201ENSMUST00000214944 1415 ntBASIC11.71□□□□□ -0.53
Scn8aQ9WTU3 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Scn8aQ9WTU3 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Scn8aQ9WTU3 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Scn8aQ9WTU3 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC11.71□□□□□ -0.53
Scn8aQ9WTU3 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Scn8aQ9WTU3 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC11.71□□□□□ -0.53
Scn8aQ9WTU3 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Scn8aQ9WTU3 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Scn8aQ9WTU3 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Scn8aQ9WTU3 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC11.71□□□□□ -0.53
Scn8aQ9WTU3 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC11.71□□□□□ -0.53
Scn8aQ9WTU3 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.71□□□□□ -0.53
Scn8aQ9WTU3 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC11.71□□□□□ -0.53
Scn8aQ9WTU3 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC11.71□□□□□ -0.53
Scn8aQ9WTU3 Gm9645-201ENSMUST00000197131 792 ntBASIC11.71□□□□□ -0.53
Scn8aQ9WTU3 Gm9353-201ENSMUST00000200472 604 ntBASIC11.71□□□□□ -0.53
Scn8aQ9WTU3 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC11.71□□□□□ -0.53
Scn8aQ9WTU3 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Scn8aQ9WTU3 Gm18561-201ENSMUST00000206027 804 ntBASIC11.71□□□□□ -0.53
Scn8aQ9WTU3 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC11.71□□□□□ -0.53
Scn8aQ9WTU3 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Scn8aQ9WTU3 Gm9415-201ENSMUST00000200462 1321 ntBASIC11.71□□□□□ -0.53
Scn8aQ9WTU3 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Scn8aQ9WTU3 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Scn8aQ9WTU3 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Scn8aQ9WTU3 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Scn8aQ9WTU3 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Scn8aQ9WTU3 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Scn8aQ9WTU3 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Scn8aQ9WTU3 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Scn8aQ9WTU3 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Scn8aQ9WTU3 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Scn8aQ9WTU3 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Scn8aQ9WTU3 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Scn8aQ9WTU3 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Scn8aQ9WTU3 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Scn8aQ9WTU3 CT010447.1-201ENSMUST00000225657 1608 ntBASIC11.71□□□□□ -0.54
Scn8aQ9WTU3 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Scn8aQ9WTU3 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Scn8aQ9WTU3 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Scn8aQ9WTU3 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Scn8aQ9WTU3 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Scn8aQ9WTU3 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Scn8aQ9WTU3 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Scn8aQ9WTU3 Gm12218-201ENSMUST00000117666 399 ntBASIC11.7□□□□□ -0.54
Scn8aQ9WTU3 Gm24992-201ENSMUST00000157412 130 ntBASIC11.7□□□□□ -0.54
Scn8aQ9WTU3 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.7□□□□□ -0.54
Scn8aQ9WTU3 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC11.7□□□□□ -0.54
Scn8aQ9WTU3 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC11.7□□□□□ -0.54
Scn8aQ9WTU3 Gm8197-202ENSMUST00000193422 934 ntBASIC11.7□□□□□ -0.54
Scn8aQ9WTU3 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Scn8aQ9WTU3 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
Scn8aQ9WTU3 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Scn8aQ9WTU3 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Scn8aQ9WTU3 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Scn8aQ9WTU3 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Scn8aQ9WTU3 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Scn8aQ9WTU3 AC130823.1-201ENSMUST00000228929 1549 ntBASIC11.7□□□□□ -0.54
Scn8aQ9WTU3 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Scn8aQ9WTU3 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Scn8aQ9WTU3 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Scn8aQ9WTU3 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Scn8aQ9WTU3 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Scn8aQ9WTU3 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Scn8aQ9WTU3 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Scn8aQ9WTU3 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Scn8aQ9WTU3 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Scn8aQ9WTU3 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Scn8aQ9WTU3 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC11.7□□□□□ -0.54
Scn8aQ9WTU3 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Scn8aQ9WTU3 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC11.7□□□□□ -0.54
Scn8aQ9WTU3 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Scn8aQ9WTU3 Gm43966-201ENSMUST00000203301 612 ntBASIC11.7□□□□□ -0.54
Scn8aQ9WTU3 Lgi3-203ENSMUST00000226548 1001 ntBASIC11.7□□□□□ -0.54
Scn8aQ9WTU3 AC159103.1-201ENSMUST00000228325 429 ntBASIC11.7□□□□□ -0.54
Scn8aQ9WTU3 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Scn8aQ9WTU3 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Scn8aQ9WTU3 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Scn8aQ9WTU3 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Scn8aQ9WTU3 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.7□□□□□ -0.54
Scn8aQ9WTU3 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Scn8aQ9WTU3 Gm37931-201ENSMUST00000194686 2866 ntBASIC11.7□□□□□ -0.54
Scn8aQ9WTU3 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scn8aQ9WTU3 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scn8aQ9WTU3 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Scn8aQ9WTU3 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Scn8aQ9WTU3 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scn8aQ9WTU3 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scn8aQ9WTU3 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Scn8aQ9WTU3 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms