Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm44190-201ENSMUST00000205083 1401 ntBASIC11.25□□□□□ -0.61
Upk3aQ9JKX8 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.25□□□□□ -0.61
Upk3aQ9JKX8 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
Upk3aQ9JKX8 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Upk3aQ9JKX8 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Upk3aQ9JKX8 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Upk3aQ9JKX8 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Upk3aQ9JKX8 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
Upk3aQ9JKX8 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Upk3aQ9JKX8 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Upk3aQ9JKX8 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Upk3aQ9JKX8 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Upk3aQ9JKX8 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Upk3aQ9JKX8 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Upk3aQ9JKX8 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Upk3aQ9JKX8 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC11.24□□□□□ -0.61
Upk3aQ9JKX8 Gm6335-201ENSMUST00000118081 1194 ntBASIC11.24□□□□□ -0.61
Upk3aQ9JKX8 Gm7816-201ENSMUST00000119884 1194 ntBASIC11.24□□□□□ -0.61
Upk3aQ9JKX8 Gm15542-201ENSMUST00000121585 1194 ntBASIC11.24□□□□□ -0.61
Upk3aQ9JKX8 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Upk3aQ9JKX8 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Upk3aQ9JKX8 Gm23699-201ENSMUST00000158835 135 ntBASIC11.24□□□□□ -0.61
Upk3aQ9JKX8 Gm16570-201ENSMUST00000161951 436 ntBASIC11.24□□□□□ -0.61
Upk3aQ9JKX8 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC11.24□□□□□ -0.61
Upk3aQ9JKX8 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Upk3aQ9JKX8 Gm19353-201ENSMUST00000184561 445 ntBASIC11.24□□□□□ -0.61
Upk3aQ9JKX8 Gm10774-201ENSMUST00000188689 204 ntBASIC11.24□□□□□ -0.61
Upk3aQ9JKX8 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC11.24□□□□□ -0.61
Upk3aQ9JKX8 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC11.24□□□□□ -0.61
Upk3aQ9JKX8 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
Upk3aQ9JKX8 Gm9555-201ENSMUST00000200908 583 ntBASIC11.24□□□□□ -0.61
Upk3aQ9JKX8 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Upk3aQ9JKX8 Gm10254-201ENSMUST00000052888 867 ntBASIC11.24□□□□□ -0.61
Upk3aQ9JKX8 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11.24□□□□□ -0.61
Upk3aQ9JKX8 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Upk3aQ9JKX8 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Upk3aQ9JKX8 Gm14150-201ENSMUST00000122404 1354 ntBASIC11.24□□□□□ -0.61
Upk3aQ9JKX8 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.24□□□□□ -0.61
Upk3aQ9JKX8 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Upk3aQ9JKX8 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Upk3aQ9JKX8 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Upk3aQ9JKX8 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Upk3aQ9JKX8 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Upk3aQ9JKX8 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Upk3aQ9JKX8 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Upk3aQ9JKX8 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Upk3aQ9JKX8 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Upk3aQ9JKX8 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.24□□□□□ -0.61
Upk3aQ9JKX8 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Upk3aQ9JKX8 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
Upk3aQ9JKX8 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Upk3aQ9JKX8 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Upk3aQ9JKX8 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Upk3aQ9JKX8 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Upk3aQ9JKX8 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Upk3aQ9JKX8 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Upk3aQ9JKX8 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.23□□□□□ -0.61
Upk3aQ9JKX8 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.23□□□□□ -0.61
Upk3aQ9JKX8 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Upk3aQ9JKX8 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.23□□□□□ -0.61
Upk3aQ9JKX8 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Upk3aQ9JKX8 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Upk3aQ9JKX8 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.23□□□□□ -0.61
Upk3aQ9JKX8 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Upk3aQ9JKX8 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.23□□□□□ -0.61
Upk3aQ9JKX8 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Upk3aQ9JKX8 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Upk3aQ9JKX8 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Upk3aQ9JKX8 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Upk3aQ9JKX8 Gm22920-201ENSMUST00000102175 109 ntBASIC11.23□□□□□ -0.61
Upk3aQ9JKX8 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Upk3aQ9JKX8 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Upk3aQ9JKX8 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC11.23□□□□□ -0.61
Upk3aQ9JKX8 Gm12566-201ENSMUST00000121479 359 ntBASIC11.23□□□□□ -0.61
Upk3aQ9JKX8 Gm7150-201ENSMUST00000122032 981 ntBASIC11.23□□□□□ -0.61
Upk3aQ9JKX8 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Upk3aQ9JKX8 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Upk3aQ9JKX8 Gm3329-201ENSMUST00000159873 556 ntBASIC11.23□□□□□ -0.61
Upk3aQ9JKX8 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Upk3aQ9JKX8 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC11.23□□□□□ -0.61
Upk3aQ9JKX8 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC11.23□□□□□ -0.61
Upk3aQ9JKX8 Gm12407-201ENSMUST00000180219 324 ntBASIC11.23□□□□□ -0.61
Upk3aQ9JKX8 Gm29164-201ENSMUST00000185454 1024 ntBASIC11.23□□□□□ -0.61
Upk3aQ9JKX8 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC11.23□□□□□ -0.61
Upk3aQ9JKX8 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC11.23□□□□□ -0.61
Upk3aQ9JKX8 Gm43966-201ENSMUST00000203301 612 ntBASIC11.23□□□□□ -0.61
Upk3aQ9JKX8 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC11.23□□□□□ -0.61
Upk3aQ9JKX8 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Upk3aQ9JKX8 Spcs1-203ENSMUST00000226374 592 ntBASIC11.23□□□□□ -0.61
Upk3aQ9JKX8 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Upk3aQ9JKX8 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Upk3aQ9JKX8 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Upk3aQ9JKX8 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Upk3aQ9JKX8 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Upk3aQ9JKX8 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Upk3aQ9JKX8 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Upk3aQ9JKX8 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Upk3aQ9JKX8 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Upk3aQ9JKX8 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Upk3aQ9JKX8 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms