Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC13.94□□□□□ -0.18
Ube3bQ9ES34 Gm12029-201ENSMUST00000120073 832 ntBASIC13.94□□□□□ -0.18
Ube3bQ9ES34 Gm11244-201ENSMUST00000121243 237 ntBASIC13.94□□□□□ -0.18
Ube3bQ9ES34 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC13.94□□□□□ -0.18
Ube3bQ9ES34 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ube3bQ9ES34 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC13.94□□□□□ -0.18
Ube3bQ9ES34 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ube3bQ9ES34 Gm16701-202ENSMUST00000180995 934 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ube3bQ9ES34 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ube3bQ9ES34 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC13.94□□□□□ -0.18
Ube3bQ9ES34 Gm37299-201ENSMUST00000193951 826 ntBASIC13.94□□□□□ -0.18
Ube3bQ9ES34 Gm37981-201ENSMUST00000194280 535 ntBASIC13.94□□□□□ -0.18
Ube3bQ9ES34 Gm7504-201ENSMUST00000201449 424 ntBASIC13.94□□□□□ -0.18
Ube3bQ9ES34 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC13.94□□□□□ -0.18
Ube3bQ9ES34 Gm44126-201ENSMUST00000204831 514 ntBASIC13.94□□□□□ -0.18
Ube3bQ9ES34 Gm8285-201ENSMUST00000208293 759 ntBASIC13.94□□□□□ -0.18
Ube3bQ9ES34 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC13.94□□□□□ -0.18
Ube3bQ9ES34 AC135469.1-201ENSMUST00000225984 772 ntBASIC13.94□□□□□ -0.18
Ube3bQ9ES34 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ube3bQ9ES34 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ube3bQ9ES34 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ube3bQ9ES34 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ube3bQ9ES34 Prl6a1-201ENSMUST00000091679 1093 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Ube3bQ9ES34 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ube3bQ9ES34 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ube3bQ9ES34 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ube3bQ9ES34 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ube3bQ9ES34 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ube3bQ9ES34 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC13.94□□□□□ -0.18
Ube3bQ9ES34 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ube3bQ9ES34 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ube3bQ9ES34 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ube3bQ9ES34 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ube3bQ9ES34 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ube3bQ9ES34 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ube3bQ9ES34 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Ube3bQ9ES34 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ube3bQ9ES34 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ube3bQ9ES34 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Ube3bQ9ES34 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ube3bQ9ES34 Gm44190-201ENSMUST00000205083 1401 ntBASIC13.93□□□□□ -0.18
Ube3bQ9ES34 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ube3bQ9ES34 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ube3bQ9ES34 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC13.93□□□□□ -0.18
Ube3bQ9ES34 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Ube3bQ9ES34 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ube3bQ9ES34 Gm16071-201ENSMUST00000119589 793 ntBASIC13.93□□□□□ -0.18
Ube3bQ9ES34 Gm9089-201ENSMUST00000122027 526 ntBASIC13.93□□□□□ -0.18
Ube3bQ9ES34 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC13.93□□□□□ -0.18
Ube3bQ9ES34 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC13.93□□□□□ -0.18
Ube3bQ9ES34 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ube3bQ9ES34 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ube3bQ9ES34 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ube3bQ9ES34 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC13.93□□□□□ -0.18
Ube3bQ9ES34 Gm17826-201ENSMUST00000189720 798 ntBASIC13.93□□□□□ -0.18
Ube3bQ9ES34 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC13.93□□□□□ -0.18
Ube3bQ9ES34 Gm38114-201ENSMUST00000191877 1232 ntBASIC13.93□□□□□ -0.18
Ube3bQ9ES34 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ube3bQ9ES34 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC13.93□□□□□ -0.18
Ube3bQ9ES34 Gm44421-201ENSMUST00000205064 1221 ntBASIC13.93□□□□□ -0.18
Ube3bQ9ES34 Gm44980-201ENSMUST00000205826 314 ntBASIC13.93□□□□□ -0.18
Ube3bQ9ES34 Gm9463-201ENSMUST00000206707 601 ntBASIC13.93□□□□□ -0.18
Ube3bQ9ES34 Gm8342-201ENSMUST00000209839 757 ntBASIC13.93□□□□□ -0.18
Ube3bQ9ES34 E330011O21Rik-205ENSMUST00000211317 1062 ntTSL 5 BASIC13.93□□□□□ -0.18
Ube3bQ9ES34 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC13.93□□□□□ -0.18
Ube3bQ9ES34 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC13.93□□□□□ -0.18
Ube3bQ9ES34 Snora73b-201ENSMUST00000083419 205 ntBASIC13.93□□□□□ -0.18
Ube3bQ9ES34 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ube3bQ9ES34 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ube3bQ9ES34 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ube3bQ9ES34 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC13.93□□□□□ -0.18
Ube3bQ9ES34 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ube3bQ9ES34 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ube3bQ9ES34 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Ube3bQ9ES34 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Ube3bQ9ES34 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ube3bQ9ES34 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ube3bQ9ES34 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ube3bQ9ES34 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ube3bQ9ES34 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ube3bQ9ES34 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ube3bQ9ES34 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Ube3bQ9ES34 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ube3bQ9ES34 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
Ube3bQ9ES34 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ube3bQ9ES34 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Ube3bQ9ES34 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ube3bQ9ES34 Gm12247-201ENSMUST00000117585 670 ntBASIC13.92□□□□□ -0.18
Ube3bQ9ES34 Gm11246-201ENSMUST00000120880 345 ntBASIC13.92□□□□□ -0.18
Ube3bQ9ES34 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ube3bQ9ES34 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC13.92□□□□□ -0.18
Ube3bQ9ES34 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ube3bQ9ES34 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ube3bQ9ES34 Gm10731-201ENSMUST00000181171 448 ntBASIC13.92□□□□□ -0.18
Ube3bQ9ES34 Gm37458-201ENSMUST00000194055 410 ntBASIC13.92□□□□□ -0.18
Ube3bQ9ES34 Gm45550-201ENSMUST00000209380 946 ntBASIC13.92□□□□□ -0.18
Ube3bQ9ES34 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ube3bQ9ES34 AC153505.1-201ENSMUST00000218819 1071 ntBASIC13.92□□□□□ -0.18
Ube3bQ9ES34 CT009546.1-201ENSMUST00000222573 1120 ntBASIC13.92□□□□□ -0.18
Ube3bQ9ES34 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms