Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cdc40Q9DC48 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdc40Q9DC48 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cdc40Q9DC48 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdc40Q9DC48 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Cdc40Q9DC48 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdc40Q9DC48 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdc40Q9DC48 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdc40Q9DC48 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdc40Q9DC48 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdc40Q9DC48 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cdc40Q9DC48 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cdc40Q9DC48 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdc40Q9DC48 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdc40Q9DC48 Gm45428-201ENSMUST00000209619 1789 ntBASIC10.91□□□□□ -0.66
Cdc40Q9DC48 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Cdc40Q9DC48 AC126257.1-201ENSMUST00000213195 1536 ntBASIC10.91□□□□□ -0.66
Cdc40Q9DC48 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Cdc40Q9DC48 Gm15515-201ENSMUST00000117827 822 ntBASIC10.91□□□□□ -0.66
Cdc40Q9DC48 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC10.91□□□□□ -0.66
Cdc40Q9DC48 Gm10051-201ENSMUST00000145209 414 ntBASIC10.91□□□□□ -0.66
Cdc40Q9DC48 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC10.91□□□□□ -0.66
Cdc40Q9DC48 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdc40Q9DC48 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC10.91□□□□□ -0.66
Cdc40Q9DC48 Gm24514-201ENSMUST00000174961 285 ntBASIC10.91□□□□□ -0.66
Cdc40Q9DC48 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC10.91□□□□□ -0.66
Cdc40Q9DC48 Gm3508-201ENSMUST00000186012 792 ntBASIC10.91□□□□□ -0.66
Cdc40Q9DC48 Ighv4-2-201ENSMUST00000192975 362 ntBASIC10.91□□□□□ -0.66
Cdc40Q9DC48 Gm18636-201ENSMUST00000218846 1066 ntBASIC10.91□□□□□ -0.66
Cdc40Q9DC48 AC154680.1-201ENSMUST00000224376 859 ntBASIC10.91□□□□□ -0.66
Cdc40Q9DC48 AC131330.1-201ENSMUST00000227814 1015 ntBASIC10.91□□□□□ -0.66
Cdc40Q9DC48 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdc40Q9DC48 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC10.91□□□□□ -0.66
Cdc40Q9DC48 Gm43174-201ENSMUST00000195914 2445 ntBASIC10.91□□□□□ -0.66
Cdc40Q9DC48 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdc40Q9DC48 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cdc40Q9DC48 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC10.91□□□□□ -0.66
Cdc40Q9DC48 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdc40Q9DC48 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdc40Q9DC48 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cdc40Q9DC48 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cdc40Q9DC48 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdc40Q9DC48 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdc40Q9DC48 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdc40Q9DC48 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cdc40Q9DC48 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Cdc40Q9DC48 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cdc40Q9DC48 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdc40Q9DC48 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdc40Q9DC48 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cdc40Q9DC48 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cdc40Q9DC48 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cdc40Q9DC48 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cdc40Q9DC48 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cdc40Q9DC48 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cdc40Q9DC48 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cdc40Q9DC48 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC10.9□□□□□ -0.66
Cdc40Q9DC48 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cdc40Q9DC48 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cdc40Q9DC48 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Cdc40Q9DC48 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC10.9□□□□□ -0.66
Cdc40Q9DC48 Gm15172-201ENSMUST00000118945 1046 ntBASIC10.9□□□□□ -0.66
Cdc40Q9DC48 Gm5419-201ENSMUST00000119301 527 ntBASIC10.9□□□□□ -0.66
Cdc40Q9DC48 Gm7722-201ENSMUST00000120646 741 ntBASIC10.9□□□□□ -0.66
Cdc40Q9DC48 Gm25881-201ENSMUST00000157783 103 ntBASIC10.9□□□□□ -0.66
Cdc40Q9DC48 Gm9550-201ENSMUST00000161130 862 ntBASIC10.9□□□□□ -0.66
Cdc40Q9DC48 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC10.9□□□□□ -0.66
Cdc40Q9DC48 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC10.9□□□□□ -0.66
Cdc40Q9DC48 Gm37246-201ENSMUST00000192665 835 ntBASIC10.9□□□□□ -0.66
Cdc40Q9DC48 Gm43184-201ENSMUST00000197247 542 ntBASIC10.9□□□□□ -0.66
Cdc40Q9DC48 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC10.9□□□□□ -0.66
Cdc40Q9DC48 Gm18393-201ENSMUST00000208349 1131 ntBASIC10.9□□□□□ -0.66
Cdc40Q9DC48 Gm5369-201ENSMUST00000217499 588 ntBASIC10.9□□□□□ -0.66
Cdc40Q9DC48 Gm1821-202ENSMUST00000227415 750 ntBASIC10.9□□□□□ -0.66
Cdc40Q9DC48 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cdc40Q9DC48 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cdc40Q9DC48 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cdc40Q9DC48 Gm21811-201ENSMUST00000096485 930 ntBASIC10.9□□□□□ -0.66
Cdc40Q9DC48 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cdc40Q9DC48 AC138329.2-201ENSMUST00000225579 1842 ntBASIC10.9□□□□□ -0.66
Cdc40Q9DC48 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cdc40Q9DC48 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cdc40Q9DC48 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cdc40Q9DC48 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cdc40Q9DC48 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cdc40Q9DC48 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC10.9□□□□□ -0.66
Cdc40Q9DC48 AC159308.2-201ENSMUST00000213592 2325 ntBASIC10.9□□□□□ -0.67
Cdc40Q9DC48 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Cdc40Q9DC48 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Cdc40Q9DC48 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Cdc40Q9DC48 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Cdc40Q9DC48 Gm19692-201ENSMUST00000203856 2084 ntBASIC10.89□□□□□ -0.67
Cdc40Q9DC48 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cdc40Q9DC48 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cdc40Q9DC48 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cdc40Q9DC48 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdc40Q9DC48 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdc40Q9DC48 Gm13812-201ENSMUST00000118061 1347 ntBASIC10.89□□□□□ -0.67
Cdc40Q9DC48 Gm13810-201ENSMUST00000118584 1347 ntBASIC10.89□□□□□ -0.67
Cdc40Q9DC48 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms