Protein–RNA interactions for Protein: Q9D6Z1

Nop56, Nucleolar protein 56, mousemouse

Known RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop56Q9D6Z1 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nop56Q9D6Z1 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Nop56Q9D6Z1 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.12□□□□□ -0.47
Nop56Q9D6Z1 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nop56Q9D6Z1 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nop56Q9D6Z1 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Nop56Q9D6Z1 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nop56Q9D6Z1 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nop56Q9D6Z1 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nop56Q9D6Z1 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.11□□□□□ -0.47
Nop56Q9D6Z1 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nop56Q9D6Z1 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nop56Q9D6Z1 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nop56Q9D6Z1 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nop56Q9D6Z1 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nop56Q9D6Z1 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Nop56Q9D6Z1 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nop56Q9D6Z1 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Nop56Q9D6Z1 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Nop56Q9D6Z1 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nop56Q9D6Z1 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.11□□□□□ -0.47
Nop56Q9D6Z1 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nop56Q9D6Z1 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.11□□□□□ -0.47
Nop56Q9D6Z1 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nop56Q9D6Z1 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nop56Q9D6Z1 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.11□□□□□ -0.47
Nop56Q9D6Z1 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nop56Q9D6Z1 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nop56Q9D6Z1 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nop56Q9D6Z1 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nop56Q9D6Z1 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nop56Q9D6Z1 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC12.11□□□□□ -0.47
Nop56Q9D6Z1 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nop56Q9D6Z1 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC12.11□□□□□ -0.47
Nop56Q9D6Z1 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nop56Q9D6Z1 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nop56Q9D6Z1 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.11□□□□□ -0.47
Nop56Q9D6Z1 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.11□□□□□ -0.47
Nop56Q9D6Z1 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Nop56Q9D6Z1 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Nop56Q9D6Z1 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nop56Q9D6Z1 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nop56Q9D6Z1 Gm45206-201ENSMUST00000206885 2285 ntBASIC12.11□□□□□ -0.47
Nop56Q9D6Z1 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nop56Q9D6Z1 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nop56Q9D6Z1 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nop56Q9D6Z1 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nop56Q9D6Z1 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Nop56Q9D6Z1 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Nop56Q9D6Z1 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nop56Q9D6Z1 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC12.1□□□□□ -0.47
Nop56Q9D6Z1 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Nop56Q9D6Z1 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.1□□□□□ -0.47
Nop56Q9D6Z1 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC12.1□□□□□ -0.47
Nop56Q9D6Z1 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nop56Q9D6Z1 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Nop56Q9D6Z1 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC12.1□□□□□ -0.47
Nop56Q9D6Z1 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nop56Q9D6Z1 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.1□□□□□ -0.47
Nop56Q9D6Z1 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nop56Q9D6Z1 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nop56Q9D6Z1 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Nop56Q9D6Z1 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Nop56Q9D6Z1 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Nop56Q9D6Z1 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Nop56Q9D6Z1 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.1□□□□□ -0.47
Nop56Q9D6Z1 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.1□□□□□ -0.47
Nop56Q9D6Z1 Gm15610-201ENSMUST00000120584 195 ntBASIC12.1□□□□□ -0.47
Nop56Q9D6Z1 Rprl1-201ENSMUST00000158050 327 ntBASIC12.1□□□□□ -0.47
Nop56Q9D6Z1 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nop56Q9D6Z1 Gm5706-201ENSMUST00000181525 993 ntBASIC12.1□□□□□ -0.47
Nop56Q9D6Z1 Gm6222-202ENSMUST00000182143 629 ntBASIC12.1□□□□□ -0.47
Nop56Q9D6Z1 Gm5035-201ENSMUST00000215581 927 ntBASIC12.1□□□□□ -0.47
Nop56Q9D6Z1 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.1□□□□□ -0.47
Nop56Q9D6Z1 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.1□□□□□ -0.47
Nop56Q9D6Z1 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.1□□□□□ -0.47
Nop56Q9D6Z1 Wdyhv1-206ENSMUST00000227142 786 ntBASIC12.1□□□□□ -0.47
Nop56Q9D6Z1 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nop56Q9D6Z1 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC12.1□□□□□ -0.47
Nop56Q9D6Z1 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nop56Q9D6Z1 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.1□□□□□ -0.47
Nop56Q9D6Z1 Gm37954-201ENSMUST00000195400 2071 ntBASIC12.1□□□□□ -0.47
Nop56Q9D6Z1 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC12.1□□□□□ -0.47
Nop56Q9D6Z1 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nop56Q9D6Z1 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.1□□□□□ -0.47
Nop56Q9D6Z1 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nop56Q9D6Z1 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nop56Q9D6Z1 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Nop56Q9D6Z1 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nop56Q9D6Z1 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Nop56Q9D6Z1 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nop56Q9D6Z1 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nop56Q9D6Z1 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nop56Q9D6Z1 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC12.1□□□□□ -0.47
Nop56Q9D6Z1 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nop56Q9D6Z1 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nop56Q9D6Z1 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nop56Q9D6Z1 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nop56Q9D6Z1 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nop56Q9D6Z1 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms