Protein–RNA interactions for Protein: Q9D394

Rufy3, Protein RUFY3, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rufy3Q9D394 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rufy3Q9D394 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Rufy3Q9D394 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rufy3Q9D394 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Rufy3Q9D394 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rufy3Q9D394 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Rufy3Q9D394 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC13.7□□□□□ -0.22
Rufy3Q9D394 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rufy3Q9D394 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC13.7□□□□□ -0.22
Rufy3Q9D394 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rufy3Q9D394 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Rufy3Q9D394 Gm5869-201ENSMUST00000200248 1257 ntBASIC13.7□□□□□ -0.22
Rufy3Q9D394 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC13.7□□□□□ -0.22
Rufy3Q9D394 Gm18065-201ENSMUST00000221395 526 ntBASIC13.7□□□□□ -0.22
Rufy3Q9D394 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Rufy3Q9D394 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC13.7□□□□□ -0.22
Rufy3Q9D394 Olfr582-201ENSMUST00000098212 960 ntBASIC13.7□□□□□ -0.22
Rufy3Q9D394 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rufy3Q9D394 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rufy3Q9D394 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rufy3Q9D394 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rufy3Q9D394 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rufy3Q9D394 Gm43963-201ENSMUST00000203466 2488 ntBASIC13.7□□□□□ -0.22
Rufy3Q9D394 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rufy3Q9D394 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Rufy3Q9D394 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rufy3Q9D394 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rufy3Q9D394 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Rufy3Q9D394 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rufy3Q9D394 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.7□□□□□ -0.22
Rufy3Q9D394 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC13.69□□□□□ -0.22
Rufy3Q9D394 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Rufy3Q9D394 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rufy3Q9D394 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rufy3Q9D394 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rufy3Q9D394 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rufy3Q9D394 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rufy3Q9D394 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC13.69□□□□□ -0.22
Rufy3Q9D394 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rufy3Q9D394 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rufy3Q9D394 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Rufy3Q9D394 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Rufy3Q9D394 Gm12380-201ENSMUST00000119012 544 ntBASIC13.69□□□□□ -0.22
Rufy3Q9D394 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC13.69□□□□□ -0.22
Rufy3Q9D394 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC13.69□□□□□ -0.22
Rufy3Q9D394 Gm24749-201ENSMUST00000157838 343 ntBASIC13.69□□□□□ -0.22
Rufy3Q9D394 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC13.69□□□□□ -0.22
Rufy3Q9D394 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC13.69□□□□□ -0.22
Rufy3Q9D394 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rufy3Q9D394 Gm43184-201ENSMUST00000197247 542 ntBASIC13.69□□□□□ -0.22
Rufy3Q9D394 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC13.69□□□□□ -0.22
Rufy3Q9D394 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rufy3Q9D394 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rufy3Q9D394 AC113082.1-201ENSMUST00000217324 327 ntBASIC13.69□□□□□ -0.22
Rufy3Q9D394 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rufy3Q9D394 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rufy3Q9D394 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rufy3Q9D394 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rufy3Q9D394 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rufy3Q9D394 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Rufy3Q9D394 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rufy3Q9D394 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rufy3Q9D394 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rufy3Q9D394 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rufy3Q9D394 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rufy3Q9D394 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.68□□□□□ -0.22
Rufy3Q9D394 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rufy3Q9D394 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC13.68□□□□□ -0.22
Rufy3Q9D394 AC154537.1-201ENSMUST00000226101 1304 ntBASIC13.68□□□□□ -0.22
Rufy3Q9D394 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC13.68□□□□□ -0.22
Rufy3Q9D394 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rufy3Q9D394 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC13.68□□□□□ -0.22
Rufy3Q9D394 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rufy3Q9D394 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rufy3Q9D394 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rufy3Q9D394 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rufy3Q9D394 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Rufy3Q9D394 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rufy3Q9D394 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rufy3Q9D394 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rufy3Q9D394 Gm45433-201ENSMUST00000209386 247 ntBASIC13.68□□□□□ -0.22
Rufy3Q9D394 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rufy3Q9D394 Gm7940-201ENSMUST00000218195 769 ntBASIC13.68□□□□□ -0.22
Rufy3Q9D394 Gm270-201ENSMUST00000223010 976 ntBASIC13.68□□□□□ -0.22
Rufy3Q9D394 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rufy3Q9D394 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC13.68□□□□□ -0.22
Rufy3Q9D394 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rufy3Q9D394 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rufy3Q9D394 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rufy3Q9D394 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rufy3Q9D394 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rufy3Q9D394 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Rufy3Q9D394 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rufy3Q9D394 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Rufy3Q9D394 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Rufy3Q9D394 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rufy3Q9D394 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rufy3Q9D394 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rufy3Q9D394 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rufy3Q9D394 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms