Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC10.97□□□□□ -0.65
Chaf1bQ9D0N7 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chaf1bQ9D0N7 Gm44755-201ENSMUST00000207830 2102 ntBASIC10.97□□□□□ -0.65
Chaf1bQ9D0N7 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Chaf1bQ9D0N7 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chaf1bQ9D0N7 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC10.97□□□□□ -0.65
Chaf1bQ9D0N7 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chaf1bQ9D0N7 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chaf1bQ9D0N7 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Chaf1bQ9D0N7 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chaf1bQ9D0N7 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chaf1bQ9D0N7 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chaf1bQ9D0N7 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Chaf1bQ9D0N7 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC10.97□□□□□ -0.65
Chaf1bQ9D0N7 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Chaf1bQ9D0N7 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC10.97□□□□□ -0.65
Chaf1bQ9D0N7 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Chaf1bQ9D0N7 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Chaf1bQ9D0N7 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
Chaf1bQ9D0N7 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC10.97□□□□□ -0.65
Chaf1bQ9D0N7 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC10.97□□□□□ -0.65
Chaf1bQ9D0N7 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chaf1bQ9D0N7 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC10.97□□□□□ -0.65
Chaf1bQ9D0N7 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chaf1bQ9D0N7 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chaf1bQ9D0N7 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Chaf1bQ9D0N7 Gm9996-201ENSMUST00000070359 913 ntBASIC10.97□□□□□ -0.65
Chaf1bQ9D0N7 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chaf1bQ9D0N7 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chaf1bQ9D0N7 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC10.97□□□□□ -0.65
Chaf1bQ9D0N7 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Chaf1bQ9D0N7 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Chaf1bQ9D0N7 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chaf1bQ9D0N7 Gm6560-201ENSMUST00000198588 1591 ntBASIC10.97□□□□□ -0.65
Chaf1bQ9D0N7 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chaf1bQ9D0N7 Gm37737-201ENSMUST00000195013 1638 ntBASIC10.97□□□□□ -0.65
Chaf1bQ9D0N7 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC10.97□□□□□ -0.65
Chaf1bQ9D0N7 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Chaf1bQ9D0N7 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Chaf1bQ9D0N7 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chaf1bQ9D0N7 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chaf1bQ9D0N7 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chaf1bQ9D0N7 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chaf1bQ9D0N7 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Chaf1bQ9D0N7 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chaf1bQ9D0N7 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chaf1bQ9D0N7 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Chaf1bQ9D0N7 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Chaf1bQ9D0N7 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.65
Chaf1bQ9D0N7 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Chaf1bQ9D0N7 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Chaf1bQ9D0N7 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Chaf1bQ9D0N7 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Chaf1bQ9D0N7 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Chaf1bQ9D0N7 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Chaf1bQ9D0N7 Gm19221-201ENSMUST00000221827 1477 ntBASIC10.96□□□□□ -0.65
Chaf1bQ9D0N7 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Chaf1bQ9D0N7 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC10.96□□□□□ -0.65
Chaf1bQ9D0N7 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Chaf1bQ9D0N7 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Chaf1bQ9D0N7 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
Chaf1bQ9D0N7 Gm13316-201ENSMUST00000140537 691 ntBASIC10.96□□□□□ -0.65
Chaf1bQ9D0N7 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC10.96□□□□□ -0.65
Chaf1bQ9D0N7 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC10.96□□□□□ -0.65
Chaf1bQ9D0N7 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Chaf1bQ9D0N7 Gm16379-201ENSMUST00000161469 348 ntBASIC10.96□□□□□ -0.65
Chaf1bQ9D0N7 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC10.96□□□□□ -0.65
Chaf1bQ9D0N7 Gm8762-201ENSMUST00000193486 339 ntBASIC10.96□□□□□ -0.65
Chaf1bQ9D0N7 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC10.96□□□□□ -0.65
Chaf1bQ9D0N7 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC10.96□□□□□ -0.65
Chaf1bQ9D0N7 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Chaf1bQ9D0N7 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Chaf1bQ9D0N7 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Chaf1bQ9D0N7 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC10.96□□□□□ -0.65
Chaf1bQ9D0N7 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Chaf1bQ9D0N7 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Chaf1bQ9D0N7 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Chaf1bQ9D0N7 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Chaf1bQ9D0N7 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.66
Chaf1bQ9D0N7 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Chaf1bQ9D0N7 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Chaf1bQ9D0N7 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Chaf1bQ9D0N7 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Chaf1bQ9D0N7 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Chaf1bQ9D0N7 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chaf1bQ9D0N7 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chaf1bQ9D0N7 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Chaf1bQ9D0N7 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Chaf1bQ9D0N7 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chaf1bQ9D0N7 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Chaf1bQ9D0N7 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chaf1bQ9D0N7 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC10.95□□□□□ -0.66
Chaf1bQ9D0N7 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Chaf1bQ9D0N7 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Chaf1bQ9D0N7 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Chaf1bQ9D0N7 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chaf1bQ9D0N7 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chaf1bQ9D0N7 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chaf1bQ9D0N7 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chaf1bQ9D0N7 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms