Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Lysmd1Q9D0E3 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lysmd1Q9D0E3 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lysmd1Q9D0E3 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lysmd1Q9D0E3 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.43□□□□□ -0.42
Lysmd1Q9D0E3 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Lysmd1Q9D0E3 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lysmd1Q9D0E3 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Lysmd1Q9D0E3 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lysmd1Q9D0E3 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lysmd1Q9D0E3 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lysmd1Q9D0E3 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lysmd1Q9D0E3 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Lysmd1Q9D0E3 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lysmd1Q9D0E3 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lysmd1Q9D0E3 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Lysmd1Q9D0E3 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Lysmd1Q9D0E3 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lysmd1Q9D0E3 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lysmd1Q9D0E3 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Lysmd1Q9D0E3 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lysmd1Q9D0E3 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC12.42□□□□□ -0.42
Lysmd1Q9D0E3 Sh2d1a-203ENSMUST00000115070 782 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lysmd1Q9D0E3 Gm14398-201ENSMUST00000117287 1073 ntBASIC12.42□□□□□ -0.42
Lysmd1Q9D0E3 Epp13-201ENSMUST00000121024 957 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Lysmd1Q9D0E3 Gm5526-201ENSMUST00000153604 423 ntBASIC12.42□□□□□ -0.42
Lysmd1Q9D0E3 Rab26-204ENSMUST00000176533 965 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Lysmd1Q9D0E3 A630023A22Rik-201ENSMUST00000178958 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lysmd1Q9D0E3 2700099C18Rik-203ENSMUST00000182475 969 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lysmd1Q9D0E3 1700019D03Rik-207ENSMUST00000191441 638 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Lysmd1Q9D0E3 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lysmd1Q9D0E3 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lysmd1Q9D0E3 AC133496.1-201ENSMUST00000223891 743 ntBASIC12.42□□□□□ -0.42
Lysmd1Q9D0E3 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lysmd1Q9D0E3 Rpl37-201ENSMUST00000045356 835 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lysmd1Q9D0E3 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Lysmd1Q9D0E3 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lysmd1Q9D0E3 Gm8873-201ENSMUST00000217847 1439 ntBASIC12.42□□□□□ -0.42
Lysmd1Q9D0E3 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lysmd1Q9D0E3 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lysmd1Q9D0E3 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lysmd1Q9D0E3 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lysmd1Q9D0E3 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lysmd1Q9D0E3 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lysmd1Q9D0E3 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lysmd1Q9D0E3 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Lysmd1Q9D0E3 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC12.41□□□□□ -0.42
Lysmd1Q9D0E3 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lysmd1Q9D0E3 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lysmd1Q9D0E3 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lysmd1Q9D0E3 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Lysmd1Q9D0E3 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.41□□□□□ -0.42
Lysmd1Q9D0E3 Gm29101-201ENSMUST00000188329 1471 ntBASIC12.41□□□□□ -0.42
Lysmd1Q9D0E3 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lysmd1Q9D0E3 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Lysmd1Q9D0E3 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Lysmd1Q9D0E3 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Lysmd1Q9D0E3 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.41□□□□□ -0.42
Lysmd1Q9D0E3 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lysmd1Q9D0E3 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lysmd1Q9D0E3 Gm5148-203ENSMUST00000108105 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lysmd1Q9D0E3 Gm8111-201ENSMUST00000117659 987 ntBASIC12.41□□□□□ -0.42
Lysmd1Q9D0E3 Gm14997-201ENSMUST00000119232 636 ntBASIC12.41□□□□□ -0.42
Lysmd1Q9D0E3 Naa38-204ENSMUST00000144531 671 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lysmd1Q9D0E3 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC12.41□□□□□ -0.42
Lysmd1Q9D0E3 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Lysmd1Q9D0E3 Gm19013-201ENSMUST00000183895 1222 ntBASIC12.41□□□□□ -0.42
Lysmd1Q9D0E3 Gm19014-201ENSMUST00000184828 1189 ntBASIC12.41□□□□□ -0.42
Lysmd1Q9D0E3 Rwdd2a-203ENSMUST00000185566 1054 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Lysmd1Q9D0E3 Gm21083-201ENSMUST00000188807 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lysmd1Q9D0E3 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC12.41□□□□□ -0.42
Lysmd1Q9D0E3 Gm31374-201ENSMUST00000213885 619 ntTSL 5 BASIC12.41□□□□□ -0.42
Lysmd1Q9D0E3 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lysmd1Q9D0E3 AC122824.1-201ENSMUST00000221705 828 ntTSL 3 BASIC12.41□□□□□ -0.42
Lysmd1Q9D0E3 AC101205.2-201ENSMUST00000226206 715 ntBASIC12.41□□□□□ -0.42
Lysmd1Q9D0E3 CT010505.2-201ENSMUST00000227918 998 ntBASIC12.41□□□□□ -0.42
Lysmd1Q9D0E3 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lysmd1Q9D0E3 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Lysmd1Q9D0E3 Krtap3-2-201ENSMUST00000092699 1031 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Lysmd1Q9D0E3 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.41□□□□□ -0.42
Lysmd1Q9D0E3 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Lysmd1Q9D0E3 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lysmd1Q9D0E3 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lysmd1Q9D0E3 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lysmd1Q9D0E3 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Lysmd1Q9D0E3 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.41□□□□□ -0.42
Lysmd1Q9D0E3 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lysmd1Q9D0E3 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lysmd1Q9D0E3 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Lysmd1Q9D0E3 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.41□□□□□ -0.42
Lysmd1Q9D0E3 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.41□□□□□ -0.42
Lysmd1Q9D0E3 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lysmd1Q9D0E3 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.4□□□□□ -0.42
Lysmd1Q9D0E3 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lysmd1Q9D0E3 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
Lysmd1Q9D0E3 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.4□□□□□ -0.42
Lysmd1Q9D0E3 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lysmd1Q9D0E3 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Lysmd1Q9D0E3 Gm1840-201ENSMUST00000051687 1432 ntBASIC12.4□□□□□ -0.42
Lysmd1Q9D0E3 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms