Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ssu72Q9CY97 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC11.61□□□□□ -0.55
Ssu72Q9CY97 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Ssu72Q9CY97 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ssu72Q9CY97 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ssu72Q9CY97 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC11.61□□□□□ -0.55
Ssu72Q9CY97 Gm12015-201ENSMUST00000117065 843 ntBASIC11.61□□□□□ -0.55
Ssu72Q9CY97 Gm6023-201ENSMUST00000118217 606 ntBASIC11.61□□□□□ -0.55
Ssu72Q9CY97 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ssu72Q9CY97 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ssu72Q9CY97 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.61□□□□□ -0.55
Ssu72Q9CY97 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ssu72Q9CY97 Gm4607-201ENSMUST00000206649 577 ntBASIC11.61□□□□□ -0.55
Ssu72Q9CY97 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ssu72Q9CY97 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.61□□□□□ -0.55
Ssu72Q9CY97 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.61□□□□□ -0.55
Ssu72Q9CY97 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.61□□□□□ -0.55
Ssu72Q9CY97 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.61□□□□□ -0.55
Ssu72Q9CY97 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ssu72Q9CY97 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Ssu72Q9CY97 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC11.61□□□□□ -0.55
Ssu72Q9CY97 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ssu72Q9CY97 AC124577.2-201ENSMUST00000217413 2420 ntBASIC11.61□□□□□ -0.55
Ssu72Q9CY97 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ssu72Q9CY97 Gm37122-201ENSMUST00000195313 1567 ntBASIC11.61□□□□□ -0.55
Ssu72Q9CY97 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Ssu72Q9CY97 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ssu72Q9CY97 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ssu72Q9CY97 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC11.61□□□□□ -0.55
Ssu72Q9CY97 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ssu72Q9CY97 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ssu72Q9CY97 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ssu72Q9CY97 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ssu72Q9CY97 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ssu72Q9CY97 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.6□□□□□ -0.55
Ssu72Q9CY97 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ssu72Q9CY97 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ssu72Q9CY97 Gm18798-201ENSMUST00000187264 1700 ntBASIC11.6□□□□□ -0.55
Ssu72Q9CY97 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC11.6□□□□□ -0.55
Ssu72Q9CY97 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ssu72Q9CY97 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Ssu72Q9CY97 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ssu72Q9CY97 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ssu72Q9CY97 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ssu72Q9CY97 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ssu72Q9CY97 Gm45532-201ENSMUST00000210342 3620 ntBASIC11.6□□□□□ -0.55
Ssu72Q9CY97 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ssu72Q9CY97 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Ssu72Q9CY97 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
Ssu72Q9CY97 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ssu72Q9CY97 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC11.6□□□□□ -0.55
Ssu72Q9CY97 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Ssu72Q9CY97 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.6□□□□□ -0.55
Ssu72Q9CY97 AC166359.1-201ENSMUST00000220243 1871 ntBASIC11.6□□□□□ -0.55
Ssu72Q9CY97 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ssu72Q9CY97 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ssu72Q9CY97 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ssu72Q9CY97 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Ssu72Q9CY97 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ssu72Q9CY97 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ssu72Q9CY97 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.6□□□□□ -0.55
Ssu72Q9CY97 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ssu72Q9CY97 Gm11531-201ENSMUST00000117614 555 ntBASIC11.6□□□□□ -0.55
Ssu72Q9CY97 Gm12129-201ENSMUST00000120104 1147 ntBASIC11.6□□□□□ -0.55
Ssu72Q9CY97 Gm13297-201ENSMUST00000120205 934 ntBASIC11.6□□□□□ -0.55
Ssu72Q9CY97 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ssu72Q9CY97 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.6□□□□□ -0.55
Ssu72Q9CY97 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC11.6□□□□□ -0.55
Ssu72Q9CY97 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC11.6□□□□□ -0.55
Ssu72Q9CY97 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.6□□□□□ -0.55
Ssu72Q9CY97 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.6□□□□□ -0.55
Ssu72Q9CY97 Gm43118-201ENSMUST00000199149 775 ntBASIC11.6□□□□□ -0.55
Ssu72Q9CY97 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ssu72Q9CY97 AC160929.1-201ENSMUST00000221247 415 ntBASIC11.6□□□□□ -0.55
Ssu72Q9CY97 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC11.6□□□□□ -0.55
Ssu72Q9CY97 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.6□□□□□ -0.55
Ssu72Q9CY97 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ssu72Q9CY97 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ssu72Q9CY97 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ssu72Q9CY97 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Ssu72Q9CY97 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ssu72Q9CY97 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ssu72Q9CY97 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ssu72Q9CY97 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ssu72Q9CY97 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ssu72Q9CY97 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ssu72Q9CY97 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ssu72Q9CY97 Gm38116-201ENSMUST00000193873 1533 ntBASIC11.6□□□□□ -0.55
Ssu72Q9CY97 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ssu72Q9CY97 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ssu72Q9CY97 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.6□□□□□ -0.55
Ssu72Q9CY97 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ssu72Q9CY97 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ssu72Q9CY97 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ssu72Q9CY97 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ssu72Q9CY97 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Ssu72Q9CY97 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ssu72Q9CY97 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ssu72Q9CY97 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Ssu72Q9CY97 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms