Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ssr1Q9CY50 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Ssr1Q9CY50 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ssr1Q9CY50 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ssr1Q9CY50 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.78□□□□□ -0.36
Ssr1Q9CY50 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.78□□□□□ -0.36
Ssr1Q9CY50 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ssr1Q9CY50 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ssr1Q9CY50 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ssr1Q9CY50 Gm11793-201ENSMUST00000120433 981 ntBASIC12.78□□□□□ -0.36
Ssr1Q9CY50 Gm14832-201ENSMUST00000121289 322 ntBASIC12.78□□□□□ -0.36
Ssr1Q9CY50 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ssr1Q9CY50 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ssr1Q9CY50 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ssr1Q9CY50 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ssr1Q9CY50 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.78□□□□□ -0.36
Ssr1Q9CY50 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.78□□□□□ -0.36
Ssr1Q9CY50 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.78□□□□□ -0.36
Ssr1Q9CY50 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ssr1Q9CY50 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ssr1Q9CY50 Morn2-202ENSMUST00000227729 656 ntBASIC12.78□□□□□ -0.36
Ssr1Q9CY50 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ssr1Q9CY50 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ssr1Q9CY50 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ssr1Q9CY50 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.78□□□□□ -0.36
Ssr1Q9CY50 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Ssr1Q9CY50 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.78□□□□□ -0.36
Ssr1Q9CY50 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ssr1Q9CY50 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ssr1Q9CY50 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Ssr1Q9CY50 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ssr1Q9CY50 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.78□□□□□ -0.36
Ssr1Q9CY50 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ssr1Q9CY50 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ssr1Q9CY50 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
Ssr1Q9CY50 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.77□□□□□ -0.36
Ssr1Q9CY50 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ssr1Q9CY50 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ssr1Q9CY50 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ssr1Q9CY50 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ssr1Q9CY50 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC12.77□□□□□ -0.37
Ssr1Q9CY50 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.77□□□□□ -0.37
Ssr1Q9CY50 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Ssr1Q9CY50 Gm12036-201ENSMUST00000120008 530 ntBASIC12.77□□□□□ -0.37
Ssr1Q9CY50 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.77□□□□□ -0.37
Ssr1Q9CY50 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ssr1Q9CY50 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ssr1Q9CY50 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Ssr1Q9CY50 Gm26956-201ENSMUST00000182176 986 ntBASIC12.77□□□□□ -0.37
Ssr1Q9CY50 Gm29396-201ENSMUST00000185659 716 ntBASIC12.77□□□□□ -0.37
Ssr1Q9CY50 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.77□□□□□ -0.37
Ssr1Q9CY50 Gm18711-201ENSMUST00000199341 750 ntBASIC12.77□□□□□ -0.37
Ssr1Q9CY50 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.77□□□□□ -0.37
Ssr1Q9CY50 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ssr1Q9CY50 Gm4454-201ENSMUST00000190585 2578 ntBASIC12.77□□□□□ -0.37
Ssr1Q9CY50 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ssr1Q9CY50 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ssr1Q9CY50 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.77□□□□□ -0.37
Ssr1Q9CY50 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ssr1Q9CY50 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.77□□□□□ -0.37
Ssr1Q9CY50 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ssr1Q9CY50 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ssr1Q9CY50 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Ssr1Q9CY50 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC12.77□□□□□ -0.37
Ssr1Q9CY50 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ssr1Q9CY50 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ssr1Q9CY50 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.77□□□□□ -0.37
Ssr1Q9CY50 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC12.77□□□□□ -0.37
Ssr1Q9CY50 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ssr1Q9CY50 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ssr1Q9CY50 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ssr1Q9CY50 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Ssr1Q9CY50 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Ssr1Q9CY50 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ssr1Q9CY50 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ssr1Q9CY50 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ssr1Q9CY50 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ssr1Q9CY50 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ssr1Q9CY50 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ssr1Q9CY50 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Ssr1Q9CY50 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Ssr1Q9CY50 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ssr1Q9CY50 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ssr1Q9CY50 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ssr1Q9CY50 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ssr1Q9CY50 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ssr1Q9CY50 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Ssr1Q9CY50 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ssr1Q9CY50 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.76□□□□□ -0.37
Ssr1Q9CY50 Gm25214-201ENSMUST00000104573 129 ntBASIC12.76□□□□□ -0.37
Ssr1Q9CY50 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Ssr1Q9CY50 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ssr1Q9CY50 Gm12742-201ENSMUST00000117326 410 ntBASIC12.76□□□□□ -0.37
Ssr1Q9CY50 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ssr1Q9CY50 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.76□□□□□ -0.37
Ssr1Q9CY50 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.76□□□□□ -0.37
Ssr1Q9CY50 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.76□□□□□ -0.37
Ssr1Q9CY50 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ssr1Q9CY50 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.76□□□□□ -0.37
Ssr1Q9CY50 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms