Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Otud1Q9CUB6 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.2□□□□□ -0.62
Otud1Q9CUB6 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Otud1Q9CUB6 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Otud1Q9CUB6 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Otud1Q9CUB6 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Otud1Q9CUB6 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Otud1Q9CUB6 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.2□□□□□ -0.62
Otud1Q9CUB6 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Otud1Q9CUB6 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Otud1Q9CUB6 Gm12579-201ENSMUST00000118040 783 ntBASIC11.2□□□□□ -0.62
Otud1Q9CUB6 Gm13059-201ENSMUST00000119881 398 ntBASIC11.2□□□□□ -0.62
Otud1Q9CUB6 Gm12036-201ENSMUST00000120008 530 ntBASIC11.2□□□□□ -0.62
Otud1Q9CUB6 Gm15432-201ENSMUST00000121106 195 ntBASIC11.2□□□□□ -0.62
Otud1Q9CUB6 Gm23085-201ENSMUST00000157849 293 ntBASIC11.2□□□□□ -0.62
Otud1Q9CUB6 Gm22902-201ENSMUST00000158488 302 ntBASIC11.2□□□□□ -0.62
Otud1Q9CUB6 Gm6397-201ENSMUST00000161973 1069 ntBASIC11.2□□□□□ -0.62
Otud1Q9CUB6 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.2□□□□□ -0.62
Otud1Q9CUB6 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Otud1Q9CUB6 Gm9192-201ENSMUST00000183221 985 ntBASIC11.2□□□□□ -0.62
Otud1Q9CUB6 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Otud1Q9CUB6 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC11.2□□□□□ -0.62
Otud1Q9CUB6 Gm43084-201ENSMUST00000200696 947 ntBASIC11.2□□□□□ -0.62
Otud1Q9CUB6 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC11.2□□□□□ -0.62
Otud1Q9CUB6 AC159819.2-201ENSMUST00000216151 342 ntBASIC11.2□□□□□ -0.62
Otud1Q9CUB6 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.2□□□□□ -0.62
Otud1Q9CUB6 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Otud1Q9CUB6 AC160060.2-201ENSMUST00000220151 811 ntTSL 5 BASIC11.2□□□□□ -0.62
Otud1Q9CUB6 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Otud1Q9CUB6 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Otud1Q9CUB6 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Otud1Q9CUB6 Ginm1-202ENSMUST00000065124 300 ntBASIC11.2□□□□□ -0.62
Otud1Q9CUB6 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Otud1Q9CUB6 Gm7551-201ENSMUST00000089593 1074 ntBASIC11.2□□□□□ -0.62
Otud1Q9CUB6 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Otud1Q9CUB6 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Otud1Q9CUB6 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Otud1Q9CUB6 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Otud1Q9CUB6 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.2□□□□□ -0.62
Otud1Q9CUB6 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.2□□□□□ -0.62
Otud1Q9CUB6 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.2□□□□□ -0.62
Otud1Q9CUB6 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Otud1Q9CUB6 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Otud1Q9CUB6 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Otud1Q9CUB6 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.2□□□□□ -0.62
Otud1Q9CUB6 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Otud1Q9CUB6 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Otud1Q9CUB6 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Otud1Q9CUB6 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Otud1Q9CUB6 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.19□□□□□ -0.62
Otud1Q9CUB6 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Otud1Q9CUB6 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Otud1Q9CUB6 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Otud1Q9CUB6 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.19□□□□□ -0.62
Otud1Q9CUB6 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Otud1Q9CUB6 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Otud1Q9CUB6 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Otud1Q9CUB6 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Otud1Q9CUB6 Gm13910-201ENSMUST00000121752 1428 ntBASIC11.19□□□□□ -0.62
Otud1Q9CUB6 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC11.19□□□□□ -0.62
Otud1Q9CUB6 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Otud1Q9CUB6 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Otud1Q9CUB6 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Otud1Q9CUB6 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Otud1Q9CUB6 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Otud1Q9CUB6 Gm43081-201ENSMUST00000199082 1380 ntBASIC11.19□□□□□ -0.62
Otud1Q9CUB6 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Otud1Q9CUB6 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Otud1Q9CUB6 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.19□□□□□ -0.62
Otud1Q9CUB6 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Otud1Q9CUB6 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Otud1Q9CUB6 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
Otud1Q9CUB6 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Otud1Q9CUB6 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.19□□□□□ -0.62
Otud1Q9CUB6 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Otud1Q9CUB6 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Otud1Q9CUB6 Gm15207-201ENSMUST00000119259 442 ntBASIC11.19□□□□□ -0.62
Otud1Q9CUB6 Gm15595-201ENSMUST00000120840 961 ntBASIC11.19□□□□□ -0.62
Otud1Q9CUB6 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC11.19□□□□□ -0.62
Otud1Q9CUB6 Gm15200-201ENSMUST00000149950 410 ntTSL 2 BASIC11.19□□□□□ -0.62
Otud1Q9CUB6 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Otud1Q9CUB6 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Otud1Q9CUB6 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC11.19□□□□□ -0.62
Otud1Q9CUB6 Mir1943-201ENSMUST00000158276 73 ntBASIC11.19□□□□□ -0.62
Otud1Q9CUB6 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Otud1Q9CUB6 Gm8902-201ENSMUST00000174341 1096 ntBASIC11.19□□□□□ -0.62
Otud1Q9CUB6 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Otud1Q9CUB6 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Otud1Q9CUB6 Gm8502-201ENSMUST00000185708 901 ntBASIC11.19□□□□□ -0.62
Otud1Q9CUB6 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Otud1Q9CUB6 Gm8510-201ENSMUST00000189202 895 ntBASIC11.19□□□□□ -0.62
Otud1Q9CUB6 Gm2316-201ENSMUST00000190613 921 ntBASIC11.19□□□□□ -0.62
Otud1Q9CUB6 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Otud1Q9CUB6 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Otud1Q9CUB6 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC11.19□□□□□ -0.62
Otud1Q9CUB6 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC11.19□□□□□ -0.62
Otud1Q9CUB6 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC11.19□□□□□ -0.62
Otud1Q9CUB6 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.19□□□□□ -0.62
Otud1Q9CUB6 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Otud1Q9CUB6 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms