Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Gm19095-201ENSMUST00000220533 730 ntBASIC12.24□□□□□ -0.45
Retreg3Q9CQV4 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.24□□□□□ -0.45
Retreg3Q9CQV4 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retreg3Q9CQV4 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retreg3Q9CQV4 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retreg3Q9CQV4 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retreg3Q9CQV4 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retreg3Q9CQV4 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retreg3Q9CQV4 Olfr1247-201ENSMUST00000099771 945 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Retreg3Q9CQV4 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retreg3Q9CQV4 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retreg3Q9CQV4 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Retreg3Q9CQV4 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retreg3Q9CQV4 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Retreg3Q9CQV4 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Retreg3Q9CQV4 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retreg3Q9CQV4 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retreg3Q9CQV4 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Retreg3Q9CQV4 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retreg3Q9CQV4 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retreg3Q9CQV4 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retreg3Q9CQV4 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Retreg3Q9CQV4 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retreg3Q9CQV4 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retreg3Q9CQV4 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retreg3Q9CQV4 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Retreg3Q9CQV4 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Retreg3Q9CQV4 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retreg3Q9CQV4 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retreg3Q9CQV4 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Retreg3Q9CQV4 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Retreg3Q9CQV4 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Retreg3Q9CQV4 Gm11439-201ENSMUST00000118598 409 ntBASIC12.23□□□□□ -0.45
Retreg3Q9CQV4 Gm14975-201ENSMUST00000118741 664 ntBASIC12.23□□□□□ -0.45
Retreg3Q9CQV4 Gm14247-201ENSMUST00000120950 237 ntBASIC12.23□□□□□ -0.45
Retreg3Q9CQV4 Gm12164-201ENSMUST00000121695 551 ntBASIC12.23□□□□□ -0.45
Retreg3Q9CQV4 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.23□□□□□ -0.45
Retreg3Q9CQV4 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Retreg3Q9CQV4 Gm38317-201ENSMUST00000195564 343 ntBASIC12.23□□□□□ -0.45
Retreg3Q9CQV4 Gm45224-201ENSMUST00000208203 414 ntBASIC12.23□□□□□ -0.45
Retreg3Q9CQV4 Lrrc72-201ENSMUST00000020853 660 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Retreg3Q9CQV4 Gm29794-201ENSMUST00000218919 1247 ntBASIC12.23□□□□□ -0.45
Retreg3Q9CQV4 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.23□□□□□ -0.45
Retreg3Q9CQV4 Gm5471-201ENSMUST00000072732 337 ntBASIC12.23□□□□□ -0.45
Retreg3Q9CQV4 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Retreg3Q9CQV4 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retreg3Q9CQV4 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.23□□□□□ -0.45
Retreg3Q9CQV4 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Retreg3Q9CQV4 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retreg3Q9CQV4 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Retreg3Q9CQV4 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Retreg3Q9CQV4 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.23□□□□□ -0.45
Retreg3Q9CQV4 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Retreg3Q9CQV4 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Retreg3Q9CQV4 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retreg3Q9CQV4 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retreg3Q9CQV4 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Retreg3Q9CQV4 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Retreg3Q9CQV4 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.22□□□□□ -0.45
Retreg3Q9CQV4 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Retreg3Q9CQV4 Gm3563-201ENSMUST00000172963 1628 ntBASIC12.22□□□□□ -0.45
Retreg3Q9CQV4 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.22□□□□□ -0.45
Retreg3Q9CQV4 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retreg3Q9CQV4 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.22□□□□□ -0.45
Retreg3Q9CQV4 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Retreg3Q9CQV4 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retreg3Q9CQV4 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retreg3Q9CQV4 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Retreg3Q9CQV4 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.22□□□□□ -0.45
Retreg3Q9CQV4 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retreg3Q9CQV4 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retreg3Q9CQV4 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Retreg3Q9CQV4 Gm42852-201ENSMUST00000202649 1379 ntBASIC12.22□□□□□ -0.45
Retreg3Q9CQV4 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.22□□□□□ -0.45
Retreg3Q9CQV4 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retreg3Q9CQV4 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retreg3Q9CQV4 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retreg3Q9CQV4 Gm45172-201ENSMUST00000206054 1301 ntBASIC12.22□□□□□ -0.45
Retreg3Q9CQV4 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retreg3Q9CQV4 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.22□□□□□ -0.45
Retreg3Q9CQV4 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.22□□□□□ -0.45
Retreg3Q9CQV4 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.22□□□□□ -0.45
Retreg3Q9CQV4 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC12.22□□□□□ -0.45
Retreg3Q9CQV4 Gm7722-201ENSMUST00000120646 741 ntBASIC12.22□□□□□ -0.45
Retreg3Q9CQV4 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC12.22□□□□□ -0.45
Retreg3Q9CQV4 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC12.22□□□□□ -0.45
Retreg3Q9CQV4 Platr28-201ENSMUST00000133824 1294 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Retreg3Q9CQV4 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Retreg3Q9CQV4 4930430E12Rik-201ENSMUST00000139214 901 ntTSL 5 BASIC12.22□□□□□ -0.45
Retreg3Q9CQV4 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Retreg3Q9CQV4 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retreg3Q9CQV4 Gm29354-201ENSMUST00000187613 696 ntBASIC12.22□□□□□ -0.45
Retreg3Q9CQV4 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Retreg3Q9CQV4 Gm42997-202ENSMUST00000200321 985 ntBASIC12.22□□□□□ -0.45
Retreg3Q9CQV4 Gm44837-201ENSMUST00000206863 717 ntBASIC12.22□□□□□ -0.45
Retreg3Q9CQV4 Gm45186-201ENSMUST00000206874 478 ntBASIC12.22□□□□□ -0.45
Retreg3Q9CQV4 Gm45625-201ENSMUST00000209412 650 ntTSL 5 BASIC12.22□□□□□ -0.45
Retreg3Q9CQV4 Gm5650-201ENSMUST00000209641 598 ntBASIC12.22□□□□□ -0.45
Retreg3Q9CQV4 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Retreg3Q9CQV4 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms