Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rpa3Q9CQ71 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Rpa3Q9CQ71 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpa3Q9CQ71 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpa3Q9CQ71 Gm43242-201ENSMUST00000199507 1776 ntBASIC12.39□□□□□ -0.43
Rpa3Q9CQ71 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpa3Q9CQ71 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rpa3Q9CQ71 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
Rpa3Q9CQ71 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Rpa3Q9CQ71 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.39□□□□□ -0.43
Rpa3Q9CQ71 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.39□□□□□ -0.43
Rpa3Q9CQ71 Gm15207-201ENSMUST00000119259 442 ntBASIC12.39□□□□□ -0.43
Rpa3Q9CQ71 Gm12997-201ENSMUST00000120207 640 ntBASIC12.39□□□□□ -0.43
Rpa3Q9CQ71 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.39□□□□□ -0.43
Rpa3Q9CQ71 Gm28937-201ENSMUST00000185413 695 ntBASIC12.39□□□□□ -0.43
Rpa3Q9CQ71 Gm29400-201ENSMUST00000187208 695 ntBASIC12.39□□□□□ -0.43
Rpa3Q9CQ71 Gm28450-201ENSMUST00000187349 638 ntBASIC12.39□□□□□ -0.43
Rpa3Q9CQ71 Gm28662-201ENSMUST00000188446 695 ntBASIC12.39□□□□□ -0.43
Rpa3Q9CQ71 Gm28251-201ENSMUST00000188835 695 ntBASIC12.39□□□□□ -0.43
Rpa3Q9CQ71 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.39□□□□□ -0.43
Rpa3Q9CQ71 Gm37318-201ENSMUST00000194325 695 ntBASIC12.39□□□□□ -0.43
Rpa3Q9CQ71 Gm38017-201ENSMUST00000194768 695 ntBASIC12.39□□□□□ -0.43
Rpa3Q9CQ71 Gm37287-201ENSMUST00000195449 695 ntBASIC12.39□□□□□ -0.43
Rpa3Q9CQ71 Gm37793-201ENSMUST00000195548 695 ntBASIC12.39□□□□□ -0.43
Rpa3Q9CQ71 AC113082.1-201ENSMUST00000217324 327 ntBASIC12.39□□□□□ -0.43
Rpa3Q9CQ71 CT025694.1-201ENSMUST00000226188 934 ntBASIC12.39□□□□□ -0.43
Rpa3Q9CQ71 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Rpa3Q9CQ71 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.39□□□□□ -0.43
Rpa3Q9CQ71 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Rpa3Q9CQ71 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.39□□□□□ -0.43
Rpa3Q9CQ71 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rpa3Q9CQ71 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpa3Q9CQ71 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpa3Q9CQ71 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpa3Q9CQ71 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpa3Q9CQ71 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Rpa3Q9CQ71 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.39□□□□□ -0.43
Rpa3Q9CQ71 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rpa3Q9CQ71 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC12.39□□□□□ -0.43
Rpa3Q9CQ71 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpa3Q9CQ71 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Rpa3Q9CQ71 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.39□□□□□ -0.43
Rpa3Q9CQ71 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpa3Q9CQ71 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpa3Q9CQ71 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpa3Q9CQ71 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpa3Q9CQ71 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpa3Q9CQ71 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Rpa3Q9CQ71 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.38□□□□□ -0.43
Rpa3Q9CQ71 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rpa3Q9CQ71 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpa3Q9CQ71 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Rpa3Q9CQ71 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpa3Q9CQ71 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rpa3Q9CQ71 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpa3Q9CQ71 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rpa3Q9CQ71 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Rpa3Q9CQ71 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpa3Q9CQ71 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.38□□□□□ -0.43
Rpa3Q9CQ71 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpa3Q9CQ71 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Rpa3Q9CQ71 Gm14724-201ENSMUST00000118400 537 ntBASIC12.38□□□□□ -0.43
Rpa3Q9CQ71 Gm8566-201ENSMUST00000120174 465 ntBASIC12.38□□□□□ -0.43
Rpa3Q9CQ71 Gm11960-201ENSMUST00000122068 925 ntBASIC12.38□□□□□ -0.43
Rpa3Q9CQ71 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC12.38□□□□□ -0.43
Rpa3Q9CQ71 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.38□□□□□ -0.43
Rpa3Q9CQ71 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC12.38□□□□□ -0.43
Rpa3Q9CQ71 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rpa3Q9CQ71 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Rpa3Q9CQ71 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rpa3Q9CQ71 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.38□□□□□ -0.43
Rpa3Q9CQ71 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.38□□□□□ -0.43
Rpa3Q9CQ71 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.38□□□□□ -0.43
Rpa3Q9CQ71 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC12.38□□□□□ -0.43
Rpa3Q9CQ71 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.38□□□□□ -0.43
Rpa3Q9CQ71 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpa3Q9CQ71 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Rpa3Q9CQ71 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpa3Q9CQ71 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rpa3Q9CQ71 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpa3Q9CQ71 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.38□□□□□ -0.43
Rpa3Q9CQ71 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Rpa3Q9CQ71 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpa3Q9CQ71 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Rpa3Q9CQ71 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpa3Q9CQ71 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC12.38□□□□□ -0.43
Rpa3Q9CQ71 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpa3Q9CQ71 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.38□□□□□ -0.43
Rpa3Q9CQ71 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpa3Q9CQ71 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rpa3Q9CQ71 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Rpa3Q9CQ71 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rpa3Q9CQ71 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.37□□□□□ -0.43
Rpa3Q9CQ71 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpa3Q9CQ71 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rpa3Q9CQ71 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.37□□□□□ -0.43
Rpa3Q9CQ71 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Rpa3Q9CQ71 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpa3Q9CQ71 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rpa3Q9CQ71 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms