Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Cdh23Q99PF4 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh23Q99PF4 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh23Q99PF4 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Cdh23Q99PF4 Gm38192-201ENSMUST00000194364 1847 ntBASIC11.56□□□□□ -0.56
Cdh23Q99PF4 5730422E09Rik-201ENSMUST00000180733 1740 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh23Q99PF4 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.56□□□□□ -0.56
Cdh23Q99PF4 Gm37582-201ENSMUST00000192953 1409 ntBASIC11.56□□□□□ -0.56
Cdh23Q99PF4 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh23Q99PF4 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh23Q99PF4 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh23Q99PF4 Sh2d1a-203ENSMUST00000115070 782 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh23Q99PF4 Fam220-ps-201ENSMUST00000116535 783 ntBASIC11.56□□□□□ -0.56
Cdh23Q99PF4 Gm29593-201ENSMUST00000189827 620 ntTSL 5 BASIC11.56□□□□□ -0.56
Cdh23Q99PF4 Gm21631-201ENSMUST00000195041 754 ntBASIC11.56□□□□□ -0.56
Cdh23Q99PF4 Gm6859-201ENSMUST00000218614 989 ntBASIC11.56□□□□□ -0.56
Cdh23Q99PF4 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh23Q99PF4 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh23Q99PF4 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh23Q99PF4 Tstd2-201ENSMUST00000107770 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdh23Q99PF4 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
Cdh23Q99PF4 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.55□□□□□ -0.56
Cdh23Q99PF4 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Cdh23Q99PF4 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdh23Q99PF4 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.55□□□□□ -0.56
Cdh23Q99PF4 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdh23Q99PF4 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdh23Q99PF4 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdh23Q99PF4 Cpsf4l-201ENSMUST00000018871 1235 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cdh23Q99PF4 Galp-201ENSMUST00000037553 650 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdh23Q99PF4 Olfr1330-201ENSMUST00000094830 948 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Cdh23Q99PF4 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cdh23Q99PF4 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cdh23Q99PF4 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdh23Q99PF4 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC11.55□□□□□ -0.56
Cdh23Q99PF4 Gm11655-201ENSMUST00000153899 765 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cdh23Q99PF4 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdh23Q99PF4 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC11.55□□□□□ -0.56
Cdh23Q99PF4 Gm6291-201ENSMUST00000179994 309 ntBASIC11.55□□□□□ -0.56
Cdh23Q99PF4 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdh23Q99PF4 Gm29328-212ENSMUST00000209182 1168 ntTSL 5 BASIC11.55□□□□□ -0.56
Cdh23Q99PF4 Gm45706-201ENSMUST00000213063 2136 ntBASIC11.55□□□□□ -0.56
Cdh23Q99PF4 Gm25580-201ENSMUST00000083409 327 ntBASIC11.55□□□□□ -0.56
Cdh23Q99PF4 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdh23Q99PF4 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cdh23Q99PF4 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdh23Q99PF4 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cdh23Q99PF4 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdh23Q99PF4 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cdh23Q99PF4 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cdh23Q99PF4 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdh23Q99PF4 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Cdh23Q99PF4 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdh23Q99PF4 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdh23Q99PF4 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cdh23Q99PF4 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Cdh23Q99PF4 Psme2-201ENSMUST00000111378 795 ntTSL 5 BASIC11.54□□□□□ -0.56
Cdh23Q99PF4 Olfr874-201ENSMUST00000115004 933 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Cdh23Q99PF4 Gm13426-201ENSMUST00000117887 795 ntBASIC11.54□□□□□ -0.56
Cdh23Q99PF4 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.54□□□□□ -0.56
Cdh23Q99PF4 Gm28826-201ENSMUST00000190006 488 ntTSL 2 BASIC11.54□□□□□ -0.56
Cdh23Q99PF4 Gm37284-201ENSMUST00000193607 539 ntBASIC11.54□□□□□ -0.56
Cdh23Q99PF4 AC133496.1-201ENSMUST00000223891 743 ntBASIC11.54□□□□□ -0.56
Cdh23Q99PF4 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdh23Q99PF4 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdh23Q99PF4 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC11.54□□□□□ -0.56
Cdh23Q99PF4 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Cdh23Q99PF4 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdh23Q99PF4 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdh23Q99PF4 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdh23Q99PF4 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdh23Q99PF4 Gm5159-201ENSMUST00000212733 1652 ntBASIC11.54□□□□□ -0.56
Cdh23Q99PF4 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Cdh23Q99PF4 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdh23Q99PF4 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdh23Q99PF4 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC11.54□□□□□ -0.56
Cdh23Q99PF4 Gm14740-201ENSMUST00000118538 1150 ntBASIC11.54□□□□□ -0.56
Cdh23Q99PF4 Gm15699-201ENSMUST00000159213 280 ntTSL 5 BASIC11.54□□□□□ -0.56
Cdh23Q99PF4 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdh23Q99PF4 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdh23Q99PF4 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cdh23Q99PF4 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Cdh23Q99PF4 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdh23Q99PF4 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdh23Q99PF4 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC11.54□□□□□ -0.56
Cdh23Q99PF4 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdh23Q99PF4 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cdh23Q99PF4 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdh23Q99PF4 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Cdh23Q99PF4 Gm12028-201ENSMUST00000118065 436 ntBASIC11.54□□□□□ -0.56
Cdh23Q99PF4 Gm14148-201ENSMUST00000122433 1008 ntBASIC11.54□□□□□ -0.56
Cdh23Q99PF4 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.54□□□□□ -0.56
Cdh23Q99PF4 Gm5851-201ENSMUST00000194132 1204 ntBASIC11.54□□□□□ -0.56
Cdh23Q99PF4 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC11.54□□□□□ -0.56
Cdh23Q99PF4 Fut1-202ENSMUST00000209379 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdh23Q99PF4 Gm7589-201ENSMUST00000085631 534 ntBASIC11.54□□□□□ -0.56
Cdh23Q99PF4 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Cdh23Q99PF4 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdh23Q99PF4 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC11.54□□□□□ -0.56
Cdh23Q99PF4 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 153 ms