Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC12.36□□□□□ -0.43
Usp11Q99K46 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Usp11Q99K46 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp11Q99K46 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp11Q99K46 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Usp11Q99K46 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Usp11Q99K46 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Usp11Q99K46 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.35□□□□□ -0.43
Usp11Q99K46 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.35□□□□□ -0.43
Usp11Q99K46 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Usp11Q99K46 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Usp11Q99K46 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Usp11Q99K46 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.35□□□□□ -0.43
Usp11Q99K46 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Usp11Q99K46 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC12.35□□□□□ -0.43
Usp11Q99K46 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.35□□□□□ -0.43
Usp11Q99K46 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.35□□□□□ -0.43
Usp11Q99K46 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Usp11Q99K46 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.35□□□□□ -0.43
Usp11Q99K46 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.35□□□□□ -0.43
Usp11Q99K46 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Usp11Q99K46 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.35□□□□□ -0.43
Usp11Q99K46 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.35□□□□□ -0.43
Usp11Q99K46 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.35□□□□□ -0.43
Usp11Q99K46 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.35□□□□□ -0.43
Usp11Q99K46 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Usp11Q99K46 Gm45224-201ENSMUST00000208203 414 ntBASIC12.35□□□□□ -0.43
Usp11Q99K46 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.35□□□□□ -0.43
Usp11Q99K46 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.35□□□□□ -0.43
Usp11Q99K46 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Usp11Q99K46 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Usp11Q99K46 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Usp11Q99K46 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Usp11Q99K46 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Usp11Q99K46 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Usp11Q99K46 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Usp11Q99K46 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Usp11Q99K46 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Usp11Q99K46 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Usp11Q99K46 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.35□□□□□ -0.43
Usp11Q99K46 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp11Q99K46 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Usp11Q99K46 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC12.34□□□□□ -0.43
Usp11Q99K46 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.34□□□□□ -0.43
Usp11Q99K46 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp11Q99K46 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp11Q99K46 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Usp11Q99K46 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp11Q99K46 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Usp11Q99K46 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp11Q99K46 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Usp11Q99K46 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp11Q99K46 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Usp11Q99K46 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp11Q99K46 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Usp11Q99K46 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.34□□□□□ -0.43
Usp11Q99K46 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp11Q99K46 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp11Q99K46 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp11Q99K46 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Usp11Q99K46 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Usp11Q99K46 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp11Q99K46 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.34□□□□□ -0.43
Usp11Q99K46 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Usp11Q99K46 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp11Q99K46 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.34□□□□□ -0.43
Usp11Q99K46 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.34□□□□□ -0.43
Usp11Q99K46 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Usp11Q99K46 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.34□□□□□ -0.43
Usp11Q99K46 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Usp11Q99K46 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.34□□□□□ -0.43
Usp11Q99K46 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.34□□□□□ -0.43
Usp11Q99K46 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Usp11Q99K46 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.34□□□□□ -0.43
Usp11Q99K46 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.34□□□□□ -0.43
Usp11Q99K46 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp11Q99K46 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.34□□□□□ -0.43
Usp11Q99K46 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Usp11Q99K46 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Usp11Q99K46 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.34□□□□□ -0.43
Usp11Q99K46 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp11Q99K46 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Usp11Q99K46 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Usp11Q99K46 Gm10110-202ENSMUST00000228705 3220 ntBASIC12.34□□□□□ -0.43
Usp11Q99K46 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp11Q99K46 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp11Q99K46 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp11Q99K46 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Usp11Q99K46 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp11Q99K46 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.34□□□□□ -0.43
Usp11Q99K46 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Usp11Q99K46 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.34□□□□□ -0.43
Usp11Q99K46 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp11Q99K46 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp11Q99K46 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.34□□□□□ -0.43
Usp11Q99K46 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Usp11Q99K46 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Usp11Q99K46 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp11Q99K46 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Usp11Q99K46 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms