Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smarcd2Q99JR8 Gm43163-201ENSMUST00000196571 442 ntBASIC11.82□□□□□ -0.52
Smarcd2Q99JR8 Gm43380-201ENSMUST00000200421 220 ntBASIC11.82□□□□□ -0.52
Smarcd2Q99JR8 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Smarcd2Q99JR8 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Smarcd2Q99JR8 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC11.82□□□□□ -0.52
Smarcd2Q99JR8 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Smarcd2Q99JR8 Gm30671-201ENSMUST00000214898 318 ntBASIC11.82□□□□□ -0.52
Smarcd2Q99JR8 CT010506.1-201ENSMUST00000223673 349 ntBASIC11.82□□□□□ -0.52
Smarcd2Q99JR8 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Smarcd2Q99JR8 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Smarcd2Q99JR8 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smarcd2Q99JR8 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smarcd2Q99JR8 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smarcd2Q99JR8 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.82□□□□□ -0.52
Smarcd2Q99JR8 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smarcd2Q99JR8 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Smarcd2Q99JR8 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Smarcd2Q99JR8 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smarcd2Q99JR8 Gm43334-201ENSMUST00000197740 1318 ntBASIC11.82□□□□□ -0.52
Smarcd2Q99JR8 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smarcd2Q99JR8 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.82□□□□□ -0.52
Smarcd2Q99JR8 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC11.82□□□□□ -0.52
Smarcd2Q99JR8 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smarcd2Q99JR8 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smarcd2Q99JR8 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smarcd2Q99JR8 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Smarcd2Q99JR8 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smarcd2Q99JR8 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smarcd2Q99JR8 AC130823.1-201ENSMUST00000228929 1549 ntBASIC11.81□□□□□ -0.52
Smarcd2Q99JR8 AC158636.1-201ENSMUST00000220118 1393 ntBASIC11.81□□□□□ -0.52
Smarcd2Q99JR8 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smarcd2Q99JR8 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Smarcd2Q99JR8 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smarcd2Q99JR8 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.81□□□□□ -0.52
Smarcd2Q99JR8 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smarcd2Q99JR8 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smarcd2Q99JR8 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smarcd2Q99JR8 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Smarcd2Q99JR8 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC11.81□□□□□ -0.52
Smarcd2Q99JR8 Gm15329-201ENSMUST00000121408 155 ntBASIC11.81□□□□□ -0.52
Smarcd2Q99JR8 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC11.81□□□□□ -0.52
Smarcd2Q99JR8 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC11.81□□□□□ -0.52
Smarcd2Q99JR8 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Smarcd2Q99JR8 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smarcd2Q99JR8 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC11.81□□□□□ -0.52
Smarcd2Q99JR8 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Smarcd2Q99JR8 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Smarcd2Q99JR8 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC11.81□□□□□ -0.52
Smarcd2Q99JR8 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC11.81□□□□□ -0.52
Smarcd2Q99JR8 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC11.81□□□□□ -0.52
Smarcd2Q99JR8 Gm9884-201ENSMUST00000194343 1222 ntBASIC11.81□□□□□ -0.52
Smarcd2Q99JR8 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC11.81□□□□□ -0.52
Smarcd2Q99JR8 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC11.81□□□□□ -0.52
Smarcd2Q99JR8 Gm18514-201ENSMUST00000218980 436 ntBASIC11.81□□□□□ -0.52
Smarcd2Q99JR8 Gm4811-201ENSMUST00000220879 1220 ntBASIC11.81□□□□□ -0.52
Smarcd2Q99JR8 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Smarcd2Q99JR8 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Smarcd2Q99JR8 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smarcd2Q99JR8 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smarcd2Q99JR8 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smarcd2Q99JR8 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smarcd2Q99JR8 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smarcd2Q99JR8 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smarcd2Q99JR8 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smarcd2Q99JR8 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.81□□□□□ -0.52
Smarcd2Q99JR8 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smarcd2Q99JR8 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Smarcd2Q99JR8 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smarcd2Q99JR8 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
Smarcd2Q99JR8 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smarcd2Q99JR8 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smarcd2Q99JR8 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Smarcd2Q99JR8 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Smarcd2Q99JR8 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smarcd2Q99JR8 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smarcd2Q99JR8 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC11.8□□□□□ -0.52
Smarcd2Q99JR8 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Smarcd2Q99JR8 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smarcd2Q99JR8 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.8□□□□□ -0.52
Smarcd2Q99JR8 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Smarcd2Q99JR8 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smarcd2Q99JR8 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Smarcd2Q99JR8 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Smarcd2Q99JR8 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Smarcd2Q99JR8 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Smarcd2Q99JR8 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smarcd2Q99JR8 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smarcd2Q99JR8 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smarcd2Q99JR8 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smarcd2Q99JR8 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smarcd2Q99JR8 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Smarcd2Q99JR8 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Smarcd2Q99JR8 Gm11960-201ENSMUST00000122068 925 ntBASIC11.8□□□□□ -0.52
Smarcd2Q99JR8 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC11.8□□□□□ -0.52
Smarcd2Q99JR8 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.8□□□□□ -0.52
Smarcd2Q99JR8 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Smarcd2Q99JR8 Gm25492-201ENSMUST00000157383 129 ntBASIC11.8□□□□□ -0.52
Smarcd2Q99JR8 Gm22379-201ENSMUST00000157480 131 ntBASIC11.8□□□□□ -0.52
Smarcd2Q99JR8 Ighv2-1-201ENSMUST00000170946 353 ntBASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms