Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb3Q91XZ7 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb3Q91XZ7 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb3Q91XZ7 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.98□□□□□ -0.49
Pcdhb3Q91XZ7 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb3Q91XZ7 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb3Q91XZ7 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb3Q91XZ7 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb3Q91XZ7 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.98□□□□□ -0.49
Pcdhb3Q91XZ7 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb3Q91XZ7 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.98□□□□□ -0.49
Pcdhb3Q91XZ7 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.98□□□□□ -0.49
Pcdhb3Q91XZ7 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb3Q91XZ7 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Pcdhb3Q91XZ7 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb3Q91XZ7 Gm15198-201ENSMUST00000117283 177 ntBASIC11.98□□□□□ -0.49
Pcdhb3Q91XZ7 Gm5940-201ENSMUST00000117582 1068 ntBASIC11.98□□□□□ -0.49
Pcdhb3Q91XZ7 Gm14921-201ENSMUST00000118643 908 ntBASIC11.98□□□□□ -0.49
Pcdhb3Q91XZ7 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb3Q91XZ7 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC11.98□□□□□ -0.49
Pcdhb3Q91XZ7 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.98□□□□□ -0.49
Pcdhb3Q91XZ7 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb3Q91XZ7 Gm12088-201ENSMUST00000137364 520 ntTSL 2 BASIC11.98□□□□□ -0.49
Pcdhb3Q91XZ7 Mnd1-ps-201ENSMUST00000162462 604 ntBASIC11.98□□□□□ -0.49
Pcdhb3Q91XZ7 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.98□□□□□ -0.49
Pcdhb3Q91XZ7 Ptma-202ENSMUST00000186255 768 ntTSL 2 BASIC11.98□□□□□ -0.49
Pcdhb3Q91XZ7 1700122D07Rik-201ENSMUST00000186973 421 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb3Q91XZ7 Gm28693-202ENSMUST00000190758 331 ntBASIC11.98□□□□□ -0.49
Pcdhb3Q91XZ7 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC11.98□□□□□ -0.49
Pcdhb3Q91XZ7 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC11.98□□□□□ -0.49
Pcdhb3Q91XZ7 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC11.98□□□□□ -0.49
Pcdhb3Q91XZ7 Gm7399-201ENSMUST00000032395 858 ntBASIC11.98□□□□□ -0.49
Pcdhb3Q91XZ7 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC11.98□□□□□ -0.49
Pcdhb3Q91XZ7 Snora73a-201ENSMUST00000082453 205 ntBASIC11.98□□□□□ -0.49
Pcdhb3Q91XZ7 Speer4c-201ENSMUST00000095005 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb3Q91XZ7 Speer4d-201ENSMUST00000095006 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb3Q91XZ7 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb3Q91XZ7 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb3Q91XZ7 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb3Q91XZ7 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb3Q91XZ7 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb3Q91XZ7 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.98□□□□□ -0.49
Pcdhb3Q91XZ7 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Pcdhb3Q91XZ7 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb3Q91XZ7 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb3Q91XZ7 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb3Q91XZ7 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb3Q91XZ7 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb3Q91XZ7 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb3Q91XZ7 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb3Q91XZ7 Gm26563-202ENSMUST00000181152 1931 ntTSL 5 BASIC11.98□□□□□ -0.49
Pcdhb3Q91XZ7 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.98□□□□□ -0.49
Pcdhb3Q91XZ7 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb3Q91XZ7 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Pcdhb3Q91XZ7 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Pcdhb3Q91XZ7 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb3Q91XZ7 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Pcdhb3Q91XZ7 AC154171.2-201ENSMUST00000225219 2652 ntBASIC11.97□□□□□ -0.49
Pcdhb3Q91XZ7 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb3Q91XZ7 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb3Q91XZ7 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb3Q91XZ7 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Pcdhb3Q91XZ7 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb3Q91XZ7 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb3Q91XZ7 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Pcdhb3Q91XZ7 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.97□□□□□ -0.49
Pcdhb3Q91XZ7 Gm14481-201ENSMUST00000117178 629 ntBASIC11.97□□□□□ -0.49
Pcdhb3Q91XZ7 Gm15719-201ENSMUST00000120619 635 ntBASIC11.97□□□□□ -0.49
Pcdhb3Q91XZ7 Gm7350-201ENSMUST00000120964 636 ntBASIC11.97□□□□□ -0.49
Pcdhb3Q91XZ7 Gm11948-201ENSMUST00000142322 539 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb3Q91XZ7 Gm16285-201ENSMUST00000162999 347 ntBASIC11.97□□□□□ -0.49
Pcdhb3Q91XZ7 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC11.97□□□□□ -0.49
Pcdhb3Q91XZ7 Gm29538-201ENSMUST00000190783 471 ntTSL 2 BASIC11.97□□□□□ -0.49
Pcdhb3Q91XZ7 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC11.97□□□□□ -0.49
Pcdhb3Q91XZ7 Gm19175-201ENSMUST00000199895 916 ntBASIC11.97□□□□□ -0.49
Pcdhb3Q91XZ7 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb3Q91XZ7 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb3Q91XZ7 Gm43952-201ENSMUST00000203765 751 ntBASIC11.97□□□□□ -0.49
Pcdhb3Q91XZ7 Gm43997-201ENSMUST00000203986 1005 ntBASIC11.97□□□□□ -0.49
Pcdhb3Q91XZ7 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC11.97□□□□□ -0.49
Pcdhb3Q91XZ7 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb3Q91XZ7 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.97□□□□□ -0.49
Pcdhb3Q91XZ7 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb3Q91XZ7 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb3Q91XZ7 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb3Q91XZ7 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Pcdhb3Q91XZ7 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb3Q91XZ7 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.97□□□□□ -0.49
Pcdhb3Q91XZ7 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb3Q91XZ7 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb3Q91XZ7 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb3Q91XZ7 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb3Q91XZ7 Fxr1-202ENSMUST00000167354 1986 ntTSL 5 BASIC11.97□□□□□ -0.49
Pcdhb3Q91XZ7 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb3Q91XZ7 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb3Q91XZ7 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb3Q91XZ7 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb3Q91XZ7 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb3Q91XZ7 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Pcdhb3Q91XZ7 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 288 ms