Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Gm6963-201ENSMUST00000147879 379 ntBASIC11.39□□□□□ -0.59
Pcdhga11Q91XY8 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga11Q91XY8 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.39□□□□□ -0.59
Pcdhga11Q91XY8 Gm27046-201ENSMUST00000182160 463 ntBASIC11.39□□□□□ -0.59
Pcdhga11Q91XY8 Gm6114-201ENSMUST00000182472 968 ntBASIC11.39□□□□□ -0.59
Pcdhga11Q91XY8 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.39□□□□□ -0.59
Pcdhga11Q91XY8 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC11.39□□□□□ -0.59
Pcdhga11Q91XY8 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.39□□□□□ -0.59
Pcdhga11Q91XY8 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC11.39□□□□□ -0.59
Pcdhga11Q91XY8 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.39□□□□□ -0.59
Pcdhga11Q91XY8 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.39□□□□□ -0.59
Pcdhga11Q91XY8 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.39□□□□□ -0.59
Pcdhga11Q91XY8 Rgr-203ENSMUST00000225070 4704 ntBASIC11.39□□□□□ -0.59
Pcdhga11Q91XY8 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga11Q91XY8 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga11Q91XY8 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga11Q91XY8 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga11Q91XY8 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Pcdhga11Q91XY8 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Pcdhga11Q91XY8 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
Pcdhga11Q91XY8 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga11Q91XY8 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga11Q91XY8 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga11Q91XY8 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga11Q91XY8 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga11Q91XY8 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga11Q91XY8 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga11Q91XY8 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga11Q91XY8 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
Pcdhga11Q91XY8 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga11Q91XY8 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga11Q91XY8 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.39□□□□□ -0.59
Pcdhga11Q91XY8 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga11Q91XY8 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga11Q91XY8 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Pcdhga11Q91XY8 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga11Q91XY8 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga11Q91XY8 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga11Q91XY8 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga11Q91XY8 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC11.38□□□□□ -0.59
Pcdhga11Q91XY8 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga11Q91XY8 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Pcdhga11Q91XY8 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga11Q91XY8 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga11Q91XY8 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga11Q91XY8 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga11Q91XY8 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Pcdhga11Q91XY8 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga11Q91XY8 Gm37613-201ENSMUST00000195677 3580 ntBASIC11.38□□□□□ -0.59
Pcdhga11Q91XY8 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
Pcdhga11Q91XY8 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga11Q91XY8 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga11Q91XY8 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga11Q91XY8 Gm5070-201ENSMUST00000177599 862 ntBASIC11.38□□□□□ -0.59
Pcdhga11Q91XY8 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Pcdhga11Q91XY8 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.38□□□□□ -0.59
Pcdhga11Q91XY8 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.38□□□□□ -0.59
Pcdhga11Q91XY8 Gm29199-201ENSMUST00000187766 775 ntBASIC11.38□□□□□ -0.59
Pcdhga11Q91XY8 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.38□□□□□ -0.59
Pcdhga11Q91XY8 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Pcdhga11Q91XY8 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga11Q91XY8 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC11.38□□□□□ -0.59
Pcdhga11Q91XY8 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.38□□□□□ -0.59
Pcdhga11Q91XY8 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga11Q91XY8 CT573034.1-201ENSMUST00000222983 313 ntBASIC11.38□□□□□ -0.59
Pcdhga11Q91XY8 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga11Q91XY8 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga11Q91XY8 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga11Q91XY8 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga11Q91XY8 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga11Q91XY8 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga11Q91XY8 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Pcdhga11Q91XY8 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga11Q91XY8 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga11Q91XY8 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga11Q91XY8 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga11Q91XY8 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Pcdhga11Q91XY8 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Pcdhga11Q91XY8 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Pcdhga11Q91XY8 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga11Q91XY8 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga11Q91XY8 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga11Q91XY8 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga11Q91XY8 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga11Q91XY8 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga11Q91XY8 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Pcdhga11Q91XY8 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga11Q91XY8 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Pcdhga11Q91XY8 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdhga11Q91XY8 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdhga11Q91XY8 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdhga11Q91XY8 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdhga11Q91XY8 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.37□□□□□ -0.59
Pcdhga11Q91XY8 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdhga11Q91XY8 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdhga11Q91XY8 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdhga11Q91XY8 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdhga11Q91XY8 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdhga11Q91XY8 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Pcdhga11Q91XY8 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms