Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc9Q8VC31 Gm15823-201ENSMUST00000064305 670 ntBASIC14.08□□□□□ -0.16
Ccdc9Q8VC31 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc9Q8VC31 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc9Q8VC31 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc9Q8VC31 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc9Q8VC31 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc9Q8VC31 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc9Q8VC31 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc9Q8VC31 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc9Q8VC31 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc9Q8VC31 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc9Q8VC31 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
Ccdc9Q8VC31 Oprm1-213ENSMUST00000105604 1616 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
Ccdc9Q8VC31 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Ccdc9Q8VC31 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC14.08□□□□□ -0.16
Ccdc9Q8VC31 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc9Q8VC31 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Ccdc9Q8VC31 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc9Q8VC31 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC14.07□□□□□ -0.16
Ccdc9Q8VC31 Zfp956-201ENSMUST00000101445 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc9Q8VC31 Tfdp1-204ENSMUST00000209885 2511 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc9Q8VC31 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.07□□□□□ -0.16
Ccdc9Q8VC31 Gm42608-201ENSMUST00000197563 2018 ntBASIC14.07□□□□□ -0.16
Ccdc9Q8VC31 Dctn1-202ENSMUST00000113907 4205 ntTSL 5 BASIC14.07□□□□□ -0.16
Ccdc9Q8VC31 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ccdc9Q8VC31 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc9Q8VC31 Hsd3b5-201ENSMUST00000044094 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc9Q8VC31 Agbl5-201ENSMUST00000069705 2922 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc9Q8VC31 Gm43307-201ENSMUST00000199465 2371 ntBASIC14.07□□□□□ -0.16
Ccdc9Q8VC31 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Ccdc9Q8VC31 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.07□□□□□ -0.16
Ccdc9Q8VC31 Gm15271-201ENSMUST00000134627 2110 ntTSL 5 BASIC14.07□□□□□ -0.16
Ccdc9Q8VC31 0610040B10Rik-202ENSMUST00000162890 600 ntTSL 5 BASIC14.07□□□□□ -0.16
Ccdc9Q8VC31 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc9Q8VC31 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc9Q8VC31 Gm18307-201ENSMUST00000206864 949 ntBASIC14.07□□□□□ -0.16
Ccdc9Q8VC31 Gm18624-201ENSMUST00000220966 658 ntBASIC14.07□□□□□ -0.16
Ccdc9Q8VC31 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc9Q8VC31 Gm2423-201ENSMUST00000074863 733 ntBASIC14.07□□□□□ -0.16
Ccdc9Q8VC31 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc9Q8VC31 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Ccdc9Q8VC31 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc9Q8VC31 Slc5a9-201ENSMUST00000102719 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc9Q8VC31 Gm42571-201ENSMUST00000201197 2464 ntBASIC14.07□□□□□ -0.16
Ccdc9Q8VC31 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Ccdc9Q8VC31 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc9Q8VC31 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc9Q8VC31 Zfp141-203ENSMUST00000174407 4069 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc9Q8VC31 Gm29358-202ENSMUST00000187941 3227 ntBASIC14.07□□□□□ -0.16
Ccdc9Q8VC31 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc9Q8VC31 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc9Q8VC31 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc9Q8VC31 Gm14565-201ENSMUST00000140021 2494 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc9Q8VC31 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc9Q8VC31 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc9Q8VC31 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC14.06□□□□□ -0.16
Ccdc9Q8VC31 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc9Q8VC31 Cxcr2-201ENSMUST00000027372 2220 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ccdc9Q8VC31 Bcat1-203ENSMUST00000111742 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc9Q8VC31 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Ccdc9Q8VC31 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc9Q8VC31 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC14.06□□□□□ -0.16
Ccdc9Q8VC31 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc9Q8VC31 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc9Q8VC31 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc9Q8VC31 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc9Q8VC31 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ccdc9Q8VC31 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.06□□□□□ -0.16
Ccdc9Q8VC31 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC14.06□□□□□ -0.16
Ccdc9Q8VC31 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Ccdc9Q8VC31 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc9Q8VC31 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.06□□□□□ -0.16
Ccdc9Q8VC31 Mir7654-201ENSMUST00000185082 70 ntBASIC14.06□□□□□ -0.16
Ccdc9Q8VC31 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.06□□□□□ -0.16
Ccdc9Q8VC31 Gm42550-201ENSMUST00000201553 960 ntBASIC14.06□□□□□ -0.16
Ccdc9Q8VC31 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc9Q8VC31 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC14.06□□□□□ -0.16
Ccdc9Q8VC31 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.06□□□□□ -0.16
Ccdc9Q8VC31 AC135669.1-201ENSMUST00000213585 412 ntBASIC14.06□□□□□ -0.16
Ccdc9Q8VC31 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.06□□□□□ -0.16
Ccdc9Q8VC31 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc9Q8VC31 Epb41-202ENSMUST00000054917 4948 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Ccdc9Q8VC31 Ctso-201ENSMUST00000029649 3468 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc9Q8VC31 Gpr155-204ENSMUST00000112044 4201 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Ccdc9Q8VC31 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc9Q8VC31 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC14.06□□□□□ -0.16
Ccdc9Q8VC31 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc9Q8VC31 Gm20089-201ENSMUST00000192391 2084 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc9Q8VC31 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc9Q8VC31 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Ccdc9Q8VC31 Acot11-202ENSMUST00000102762 5689 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc9Q8VC31 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc9Q8VC31 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc9Q8VC31 Gabra5-203ENSMUST00000206734 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc9Q8VC31 Blk-201ENSMUST00000014597 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc9Q8VC31 Gm8522-201ENSMUST00000118416 1929 ntBASIC14.05□□□□□ -0.16
Ccdc9Q8VC31 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC14.05□□□□□ -0.16
Ccdc9Q8VC31 Slc7a3-202ENSMUST00000101362 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc9Q8VC31 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms