Protein–RNA interactions for Protein: Q8R429

Atp2a1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp2a1Q8R429 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Atp2a1Q8R429 Gm5380-201ENSMUST00000119296 2136 ntBASIC13.1□□□□□ -0.31
Atp2a1Q8R429 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atp2a1Q8R429 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.1□□□□□ -0.31
Atp2a1Q8R429 CT009489.1-201ENSMUST00000227740 1893 ntBASIC13.1□□□□□ -0.31
Atp2a1Q8R429 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Atp2a1Q8R429 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Atp2a1Q8R429 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atp2a1Q8R429 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atp2a1Q8R429 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
Atp2a1Q8R429 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Atp2a1Q8R429 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atp2a1Q8R429 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atp2a1Q8R429 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
Atp2a1Q8R429 AC154517.2-201ENSMUST00000220829 2458 ntBASIC13.1□□□□□ -0.31
Atp2a1Q8R429 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Atp2a1Q8R429 AC169511.2-201ENSMUST00000226674 2063 ntBASIC13.1□□□□□ -0.31
Atp2a1Q8R429 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC13.1□□□□□ -0.31
Atp2a1Q8R429 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Atp2a1Q8R429 Gm11892-201ENSMUST00000117711 1202 ntBASIC13.1□□□□□ -0.31
Atp2a1Q8R429 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Atp2a1Q8R429 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC13.1□□□□□ -0.31
Atp2a1Q8R429 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Atp2a1Q8R429 Gm28937-201ENSMUST00000185413 695 ntBASIC13.1□□□□□ -0.31
Atp2a1Q8R429 Gm29400-201ENSMUST00000187208 695 ntBASIC13.1□□□□□ -0.31
Atp2a1Q8R429 Gm28662-201ENSMUST00000188446 695 ntBASIC13.1□□□□□ -0.31
Atp2a1Q8R429 Gm28251-201ENSMUST00000188835 695 ntBASIC13.1□□□□□ -0.31
Atp2a1Q8R429 Gm37318-201ENSMUST00000194325 695 ntBASIC13.1□□□□□ -0.31
Atp2a1Q8R429 Gm38017-201ENSMUST00000194768 695 ntBASIC13.1□□□□□ -0.31
Atp2a1Q8R429 Gm37287-201ENSMUST00000195449 695 ntBASIC13.1□□□□□ -0.31
Atp2a1Q8R429 Gm37793-201ENSMUST00000195548 695 ntBASIC13.1□□□□□ -0.31
Atp2a1Q8R429 Gm43520-201ENSMUST00000197996 164 ntBASIC13.1□□□□□ -0.31
Atp2a1Q8R429 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Atp2a1Q8R429 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Atp2a1Q8R429 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC13.1□□□□□ -0.31
Atp2a1Q8R429 AC122350.1-201ENSMUST00000228135 533 ntBASIC13.1□□□□□ -0.31
Atp2a1Q8R429 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atp2a1Q8R429 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atp2a1Q8R429 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atp2a1Q8R429 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atp2a1Q8R429 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Atp2a1Q8R429 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atp2a1Q8R429 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Atp2a1Q8R429 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Atp2a1Q8R429 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC13.1□□□□□ -0.31
Atp2a1Q8R429 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Atp2a1Q8R429 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atp2a1Q8R429 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atp2a1Q8R429 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atp2a1Q8R429 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atp2a1Q8R429 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atp2a1Q8R429 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Atp2a1Q8R429 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atp2a1Q8R429 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atp2a1Q8R429 AC166574.4-201ENSMUST00000227165 1937 ntBASIC13.09□□□□□ -0.31
Atp2a1Q8R429 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atp2a1Q8R429 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atp2a1Q8R429 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Atp2a1Q8R429 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC13.09□□□□□ -0.31
Atp2a1Q8R429 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atp2a1Q8R429 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Atp2a1Q8R429 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Atp2a1Q8R429 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atp2a1Q8R429 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atp2a1Q8R429 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Atp2a1Q8R429 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atp2a1Q8R429 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atp2a1Q8R429 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Atp2a1Q8R429 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Atp2a1Q8R429 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC13.09□□□□□ -0.31
Atp2a1Q8R429 Gm10807-201ENSMUST00000177134 795 ntBASIC13.09□□□□□ -0.31
Atp2a1Q8R429 Gm10731-201ENSMUST00000181171 448 ntBASIC13.09□□□□□ -0.31
Atp2a1Q8R429 Gm9358-201ENSMUST00000183067 927 ntBASIC13.09□□□□□ -0.31
Atp2a1Q8R429 Gm37458-201ENSMUST00000194055 410 ntBASIC13.09□□□□□ -0.31
Atp2a1Q8R429 Gm9645-201ENSMUST00000197131 792 ntBASIC13.09□□□□□ -0.31
Atp2a1Q8R429 Gm7600-201ENSMUST00000209657 785 ntBASIC13.09□□□□□ -0.31
Atp2a1Q8R429 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Atp2a1Q8R429 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atp2a1Q8R429 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atp2a1Q8R429 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atp2a1Q8R429 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atp2a1Q8R429 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atp2a1Q8R429 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atp2a1Q8R429 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Atp2a1Q8R429 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atp2a1Q8R429 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atp2a1Q8R429 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Atp2a1Q8R429 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atp2a1Q8R429 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Atp2a1Q8R429 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Atp2a1Q8R429 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atp2a1Q8R429 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atp2a1Q8R429 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Atp2a1Q8R429 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Atp2a1Q8R429 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Atp2a1Q8R429 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Atp2a1Q8R429 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Atp2a1Q8R429 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Atp2a1Q8R429 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Atp2a1Q8R429 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 173.9 ms