Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.43□□□□□ -0.42
Ccdc87Q8CDL9 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Ccdc87Q8CDL9 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Ccdc87Q8CDL9 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc87Q8CDL9 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Ccdc87Q8CDL9 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Ccdc87Q8CDL9 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Ccdc87Q8CDL9 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc87Q8CDL9 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc87Q8CDL9 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc87Q8CDL9 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc87Q8CDL9 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc87Q8CDL9 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc87Q8CDL9 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc87Q8CDL9 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Ccdc87Q8CDL9 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Ccdc87Q8CDL9 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc87Q8CDL9 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc87Q8CDL9 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.42□□□□□ -0.42
Ccdc87Q8CDL9 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc87Q8CDL9 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc87Q8CDL9 Gm36940-201ENSMUST00000194281 2036 ntBASIC12.42□□□□□ -0.42
Ccdc87Q8CDL9 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc87Q8CDL9 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc87Q8CDL9 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc87Q8CDL9 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc87Q8CDL9 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc87Q8CDL9 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc87Q8CDL9 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.42□□□□□ -0.42
Ccdc87Q8CDL9 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc87Q8CDL9 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc87Q8CDL9 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc87Q8CDL9 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc87Q8CDL9 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc87Q8CDL9 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Ccdc87Q8CDL9 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc87Q8CDL9 Gm5419-201ENSMUST00000119301 527 ntBASIC12.42□□□□□ -0.42
Ccdc87Q8CDL9 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.42□□□□□ -0.42
Ccdc87Q8CDL9 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc87Q8CDL9 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.42□□□□□ -0.42
Ccdc87Q8CDL9 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc87Q8CDL9 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.42□□□□□ -0.42
Ccdc87Q8CDL9 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC12.42□□□□□ -0.42
Ccdc87Q8CDL9 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Ccdc87Q8CDL9 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc87Q8CDL9 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Ccdc87Q8CDL9 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Ccdc87Q8CDL9 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.42□□□□□ -0.42
Ccdc87Q8CDL9 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Ccdc87Q8CDL9 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc87Q8CDL9 AC122291.1-201ENSMUST00000228937 5748 ntBASIC12.42□□□□□ -0.42
Ccdc87Q8CDL9 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Ccdc87Q8CDL9 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc87Q8CDL9 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc87Q8CDL9 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc87Q8CDL9 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc87Q8CDL9 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC12.42□□□□□ -0.42
Ccdc87Q8CDL9 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC12.42□□□□□ -0.42
Ccdc87Q8CDL9 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc87Q8CDL9 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc87Q8CDL9 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc87Q8CDL9 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.41□□□□□ -0.42
Ccdc87Q8CDL9 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc87Q8CDL9 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc87Q8CDL9 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc87Q8CDL9 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc87Q8CDL9 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc87Q8CDL9 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Ccdc87Q8CDL9 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc87Q8CDL9 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.41□□□□□ -0.42
Ccdc87Q8CDL9 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc87Q8CDL9 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.41□□□□□ -0.42
Ccdc87Q8CDL9 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc87Q8CDL9 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.41□□□□□ -0.42
Ccdc87Q8CDL9 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Ccdc87Q8CDL9 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Ccdc87Q8CDL9 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.41□□□□□ -0.42
Ccdc87Q8CDL9 Gm807-202ENSMUST00000224929 408 ntBASIC12.41□□□□□ -0.42
Ccdc87Q8CDL9 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc87Q8CDL9 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC12.41□□□□□ -0.42
Ccdc87Q8CDL9 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Ccdc87Q8CDL9 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Ccdc87Q8CDL9 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.41□□□□□ -0.42
Ccdc87Q8CDL9 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc87Q8CDL9 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc87Q8CDL9 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Ccdc87Q8CDL9 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc87Q8CDL9 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Ccdc87Q8CDL9 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc87Q8CDL9 AC211878.3-201ENSMUST00000222629 2018 ntBASIC12.4□□□□□ -0.42
Ccdc87Q8CDL9 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc87Q8CDL9 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc87Q8CDL9 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc87Q8CDL9 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc87Q8CDL9 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc87Q8CDL9 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc87Q8CDL9 Gm15808-201ENSMUST00000119046 604 ntBASIC12.4□□□□□ -0.42
Ccdc87Q8CDL9 Gm12164-201ENSMUST00000121695 551 ntBASIC12.4□□□□□ -0.42
Ccdc87Q8CDL9 Gm15276-201ENSMUST00000145953 498 ntBASIC12.4□□□□□ -0.42
Ccdc87Q8CDL9 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms