Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC13.67□□□□□ -0.22
Vps53Q8CCB4 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps53Q8CCB4 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps53Q8CCB4 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Vps53Q8CCB4 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps53Q8CCB4 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps53Q8CCB4 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps53Q8CCB4 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Vps53Q8CCB4 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps53Q8CCB4 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps53Q8CCB4 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Vps53Q8CCB4 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps53Q8CCB4 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Vps53Q8CCB4 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps53Q8CCB4 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps53Q8CCB4 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Vps53Q8CCB4 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps53Q8CCB4 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Vps53Q8CCB4 AC108858.2-201ENSMUST00000228186 1425 ntBASIC13.66□□□□□ -0.22
Vps53Q8CCB4 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps53Q8CCB4 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps53Q8CCB4 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC13.66□□□□□ -0.22
Vps53Q8CCB4 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps53Q8CCB4 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps53Q8CCB4 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC13.66□□□□□ -0.22
Vps53Q8CCB4 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps53Q8CCB4 Gm11941-201ENSMUST00000119904 610 ntBASIC13.66□□□□□ -0.22
Vps53Q8CCB4 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps53Q8CCB4 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Vps53Q8CCB4 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Vps53Q8CCB4 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC13.66□□□□□ -0.22
Vps53Q8CCB4 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC13.66□□□□□ -0.22
Vps53Q8CCB4 AC135469.1-201ENSMUST00000225984 772 ntBASIC13.66□□□□□ -0.22
Vps53Q8CCB4 AC159103.1-201ENSMUST00000228325 429 ntBASIC13.66□□□□□ -0.22
Vps53Q8CCB4 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Vps53Q8CCB4 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Vps53Q8CCB4 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps53Q8CCB4 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps53Q8CCB4 Gm21811-201ENSMUST00000096485 930 ntBASIC13.66□□□□□ -0.22
Vps53Q8CCB4 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Vps53Q8CCB4 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps53Q8CCB4 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Vps53Q8CCB4 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps53Q8CCB4 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC13.66□□□□□ -0.22
Vps53Q8CCB4 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps53Q8CCB4 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps53Q8CCB4 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps53Q8CCB4 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Vps53Q8CCB4 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps53Q8CCB4 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps53Q8CCB4 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps53Q8CCB4 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps53Q8CCB4 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Vps53Q8CCB4 AC138329.2-201ENSMUST00000225579 1842 ntBASIC13.65□□□□□ -0.22
Vps53Q8CCB4 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps53Q8CCB4 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps53Q8CCB4 Gm22133-201ENSMUST00000102082 109 ntBASIC13.65□□□□□ -0.22
Vps53Q8CCB4 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Vps53Q8CCB4 Gm6506-201ENSMUST00000119775 1136 ntBASIC13.65□□□□□ -0.22
Vps53Q8CCB4 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC13.65□□□□□ -0.22
Vps53Q8CCB4 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC13.65□□□□□ -0.22
Vps53Q8CCB4 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC13.65□□□□□ -0.22
Vps53Q8CCB4 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC13.65□□□□□ -0.22
Vps53Q8CCB4 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC13.65□□□□□ -0.22
Vps53Q8CCB4 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC13.65□□□□□ -0.22
Vps53Q8CCB4 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Vps53Q8CCB4 Mir7677-201ENSMUST00000184226 67 ntBASIC13.65□□□□□ -0.22
Vps53Q8CCB4 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC13.65□□□□□ -0.22
Vps53Q8CCB4 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC13.65□□□□□ -0.22
Vps53Q8CCB4 AC153929.1-201ENSMUST00000219009 303 ntBASIC13.65□□□□□ -0.22
Vps53Q8CCB4 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC13.65□□□□□ -0.22
Vps53Q8CCB4 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps53Q8CCB4 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps53Q8CCB4 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Vps53Q8CCB4 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps53Q8CCB4 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps53Q8CCB4 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Vps53Q8CCB4 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps53Q8CCB4 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC13.65□□□□□ -0.22
Vps53Q8CCB4 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Vps53Q8CCB4 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps53Q8CCB4 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
Vps53Q8CCB4 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC13.65□□□□□ -0.23
Vps53Q8CCB4 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
Vps53Q8CCB4 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps53Q8CCB4 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Vps53Q8CCB4 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps53Q8CCB4 Gm43172-201ENSMUST00000202139 2137 ntBASIC13.64□□□□□ -0.23
Vps53Q8CCB4 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Vps53Q8CCB4 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Vps53Q8CCB4 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps53Q8CCB4 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps53Q8CCB4 Gm42913-201ENSMUST00000197936 1853 ntBASIC13.64□□□□□ -0.23
Vps53Q8CCB4 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps53Q8CCB4 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps53Q8CCB4 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vps53Q8CCB4 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC13.64□□□□□ -0.23
Vps53Q8CCB4 Gm8566-201ENSMUST00000120174 465 ntBASIC13.64□□□□□ -0.23
Vps53Q8CCB4 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC13.64□□□□□ -0.23
Vps53Q8CCB4 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms