Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sh3rf2Q8BZT2 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sh3rf2Q8BZT2 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sh3rf2Q8BZT2 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sh3rf2Q8BZT2 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sh3rf2Q8BZT2 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.88□□□□□ -0.51
Sh3rf2Q8BZT2 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Sh3rf2Q8BZT2 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sh3rf2Q8BZT2 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.88□□□□□ -0.51
Sh3rf2Q8BZT2 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sh3rf2Q8BZT2 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.88□□□□□ -0.51
Sh3rf2Q8BZT2 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sh3rf2Q8BZT2 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sh3rf2Q8BZT2 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sh3rf2Q8BZT2 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.87□□□□□ -0.51
Sh3rf2Q8BZT2 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sh3rf2Q8BZT2 Gm13384-201ENSMUST00000117166 1344 ntBASIC11.87□□□□□ -0.51
Sh3rf2Q8BZT2 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sh3rf2Q8BZT2 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.87□□□□□ -0.51
Sh3rf2Q8BZT2 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sh3rf2Q8BZT2 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.87□□□□□ -0.51
Sh3rf2Q8BZT2 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Sh3rf2Q8BZT2 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.87□□□□□ -0.51
Sh3rf2Q8BZT2 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sh3rf2Q8BZT2 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sh3rf2Q8BZT2 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Sh3rf2Q8BZT2 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sh3rf2Q8BZT2 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Sh3rf2Q8BZT2 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sh3rf2Q8BZT2 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sh3rf2Q8BZT2 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.87□□□□□ -0.51
Sh3rf2Q8BZT2 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sh3rf2Q8BZT2 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Sh3rf2Q8BZT2 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sh3rf2Q8BZT2 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sh3rf2Q8BZT2 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sh3rf2Q8BZT2 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.87□□□□□ -0.51
Sh3rf2Q8BZT2 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC11.87□□□□□ -0.51
Sh3rf2Q8BZT2 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sh3rf2Q8BZT2 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.87□□□□□ -0.51
Sh3rf2Q8BZT2 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Sh3rf2Q8BZT2 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC11.87□□□□□ -0.51
Sh3rf2Q8BZT2 AC165260.2-203ENSMUST00000224237 336 ntBASIC11.87□□□□□ -0.51
Sh3rf2Q8BZT2 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Sh3rf2Q8BZT2 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.87□□□□□ -0.51
Sh3rf2Q8BZT2 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sh3rf2Q8BZT2 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.87□□□□□ -0.51
Sh3rf2Q8BZT2 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sh3rf2Q8BZT2 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Sh3rf2Q8BZT2 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sh3rf2Q8BZT2 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sh3rf2Q8BZT2 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sh3rf2Q8BZT2 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sh3rf2Q8BZT2 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sh3rf2Q8BZT2 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sh3rf2Q8BZT2 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sh3rf2Q8BZT2 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Sh3rf2Q8BZT2 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sh3rf2Q8BZT2 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Sh3rf2Q8BZT2 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Sh3rf2Q8BZT2 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sh3rf2Q8BZT2 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sh3rf2Q8BZT2 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sh3rf2Q8BZT2 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sh3rf2Q8BZT2 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sh3rf2Q8BZT2 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sh3rf2Q8BZT2 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sh3rf2Q8BZT2 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Sh3rf2Q8BZT2 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sh3rf2Q8BZT2 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sh3rf2Q8BZT2 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sh3rf2Q8BZT2 Gm12856-201ENSMUST00000119471 1293 ntBASIC11.86□□□□□ -0.51
Sh3rf2Q8BZT2 Gm14942-201ENSMUST00000119642 336 ntBASIC11.86□□□□□ -0.51
Sh3rf2Q8BZT2 Gm12899-201ENSMUST00000120565 551 ntBASIC11.86□□□□□ -0.51
Sh3rf2Q8BZT2 Gm13182-201ENSMUST00000122241 312 ntBASIC11.86□□□□□ -0.51
Sh3rf2Q8BZT2 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC11.86□□□□□ -0.51
Sh3rf2Q8BZT2 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sh3rf2Q8BZT2 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.86□□□□□ -0.51
Sh3rf2Q8BZT2 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sh3rf2Q8BZT2 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC11.86□□□□□ -0.51
Sh3rf2Q8BZT2 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Sh3rf2Q8BZT2 Gm17877-201ENSMUST00000192578 814 ntBASIC11.86□□□□□ -0.51
Sh3rf2Q8BZT2 Gm42657-201ENSMUST00000201746 211 ntBASIC11.86□□□□□ -0.51
Sh3rf2Q8BZT2 Gm44315-201ENSMUST00000203041 219 ntBASIC11.86□□□□□ -0.51
Sh3rf2Q8BZT2 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sh3rf2Q8BZT2 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC11.86□□□□□ -0.51
Sh3rf2Q8BZT2 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sh3rf2Q8BZT2 Gm4978-201ENSMUST00000071565 801 ntBASIC11.86□□□□□ -0.51
Sh3rf2Q8BZT2 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Sh3rf2Q8BZT2 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sh3rf2Q8BZT2 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sh3rf2Q8BZT2 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sh3rf2Q8BZT2 Gm37105-201ENSMUST00000192251 2085 ntBASIC11.86□□□□□ -0.51
Sh3rf2Q8BZT2 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sh3rf2Q8BZT2 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
Sh3rf2Q8BZT2 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sh3rf2Q8BZT2 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sh3rf2Q8BZT2 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sh3rf2Q8BZT2 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sh3rf2Q8BZT2 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms