Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cpsf4Q8BQZ5 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cpsf4Q8BQZ5 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.37□□□□□ -0.59
Cpsf4Q8BQZ5 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cpsf4Q8BQZ5 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cpsf4Q8BQZ5 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cpsf4Q8BQZ5 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.36□□□□□ -0.59
Cpsf4Q8BQZ5 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cpsf4Q8BQZ5 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cpsf4Q8BQZ5 Gm38194-201ENSMUST00000194529 2211 ntBASIC11.36□□□□□ -0.59
Cpsf4Q8BQZ5 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cpsf4Q8BQZ5 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.36□□□□□ -0.59
Cpsf4Q8BQZ5 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.36□□□□□ -0.59
Cpsf4Q8BQZ5 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cpsf4Q8BQZ5 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cpsf4Q8BQZ5 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cpsf4Q8BQZ5 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cpsf4Q8BQZ5 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cpsf4Q8BQZ5 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
Cpsf4Q8BQZ5 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cpsf4Q8BQZ5 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cpsf4Q8BQZ5 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cpsf4Q8BQZ5 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.36□□□□□ -0.59
Cpsf4Q8BQZ5 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cpsf4Q8BQZ5 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
Cpsf4Q8BQZ5 Gm12217-201ENSMUST00000118858 696 ntBASIC11.36□□□□□ -0.59
Cpsf4Q8BQZ5 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.36□□□□□ -0.59
Cpsf4Q8BQZ5 Gm14247-201ENSMUST00000120950 237 ntBASIC11.36□□□□□ -0.59
Cpsf4Q8BQZ5 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cpsf4Q8BQZ5 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cpsf4Q8BQZ5 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
Cpsf4Q8BQZ5 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cpsf4Q8BQZ5 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cpsf4Q8BQZ5 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cpsf4Q8BQZ5 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC11.36□□□□□ -0.59
Cpsf4Q8BQZ5 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cpsf4Q8BQZ5 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.36□□□□□ -0.59
Cpsf4Q8BQZ5 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Cpsf4Q8BQZ5 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cpsf4Q8BQZ5 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Cpsf4Q8BQZ5 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.36□□□□□ -0.59
Cpsf4Q8BQZ5 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Cpsf4Q8BQZ5 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cpsf4Q8BQZ5 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cpsf4Q8BQZ5 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cpsf4Q8BQZ5 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cpsf4Q8BQZ5 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cpsf4Q8BQZ5 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cpsf4Q8BQZ5 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC11.36□□□□□ -0.59
Cpsf4Q8BQZ5 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cpsf4Q8BQZ5 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cpsf4Q8BQZ5 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC11.36□□□□□ -0.59
Cpsf4Q8BQZ5 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cpsf4Q8BQZ5 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cpsf4Q8BQZ5 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
Cpsf4Q8BQZ5 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cpsf4Q8BQZ5 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cpsf4Q8BQZ5 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Cpsf4Q8BQZ5 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cpsf4Q8BQZ5 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.35□□□□□ -0.59
Cpsf4Q8BQZ5 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cpsf4Q8BQZ5 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cpsf4Q8BQZ5 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Cpsf4Q8BQZ5 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cpsf4Q8BQZ5 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Cpsf4Q8BQZ5 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cpsf4Q8BQZ5 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cpsf4Q8BQZ5 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cpsf4Q8BQZ5 Gm12380-201ENSMUST00000119012 544 ntBASIC11.35□□□□□ -0.59
Cpsf4Q8BQZ5 Gm15610-201ENSMUST00000120584 195 ntBASIC11.35□□□□□ -0.59
Cpsf4Q8BQZ5 Gm12164-201ENSMUST00000121695 551 ntBASIC11.35□□□□□ -0.59
Cpsf4Q8BQZ5 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cpsf4Q8BQZ5 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.35□□□□□ -0.59
Cpsf4Q8BQZ5 Gm28450-201ENSMUST00000187349 638 ntBASIC11.35□□□□□ -0.59
Cpsf4Q8BQZ5 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cpsf4Q8BQZ5 Rps4l-202ENSMUST00000204242 789 ntBASIC11.35□□□□□ -0.59
Cpsf4Q8BQZ5 Gm17931-201ENSMUST00000208132 634 ntBASIC11.35□□□□□ -0.59
Cpsf4Q8BQZ5 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cpsf4Q8BQZ5 Mettl6-204ENSMUST00000227595 1027 ntBASIC11.35□□□□□ -0.59
Cpsf4Q8BQZ5 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cpsf4Q8BQZ5 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cpsf4Q8BQZ5 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cpsf4Q8BQZ5 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cpsf4Q8BQZ5 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Cpsf4Q8BQZ5 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cpsf4Q8BQZ5 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cpsf4Q8BQZ5 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cpsf4Q8BQZ5 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cpsf4Q8BQZ5 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cpsf4Q8BQZ5 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.35□□□□□ -0.59
Cpsf4Q8BQZ5 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.35□□□□□ -0.59
Cpsf4Q8BQZ5 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cpsf4Q8BQZ5 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cpsf4Q8BQZ5 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cpsf4Q8BQZ5 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cpsf4Q8BQZ5 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cpsf4Q8BQZ5 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cpsf4Q8BQZ5 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.35□□□□□ -0.59
Cpsf4Q8BQZ5 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cpsf4Q8BQZ5 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms