Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ttc28Q80XJ3 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC9.81□□□□□ -0.84
Ttc28Q80XJ3 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Ttc28Q80XJ3 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Ttc28Q80XJ3 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ttc28Q80XJ3 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ttc28Q80XJ3 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Ttc28Q80XJ3 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ttc28Q80XJ3 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Ttc28Q80XJ3 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ttc28Q80XJ3 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ttc28Q80XJ3 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
Ttc28Q80XJ3 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC9.81□□□□□ -0.84
Ttc28Q80XJ3 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Ttc28Q80XJ3 Gm24954-201ENSMUST00000178831 110 ntBASIC9.81□□□□□ -0.84
Ttc28Q80XJ3 Ighv1-2-201ENSMUST00000195325 378 ntBASIC9.81□□□□□ -0.84
Ttc28Q80XJ3 Gm37197-201ENSMUST00000195607 401 ntBASIC9.81□□□□□ -0.84
Ttc28Q80XJ3 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Ttc28Q80XJ3 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ttc28Q80XJ3 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Ttc28Q80XJ3 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC9.81□□□□□ -0.84
Ttc28Q80XJ3 Gm18123-201ENSMUST00000210874 822 ntBASIC9.81□□□□□ -0.84
Ttc28Q80XJ3 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC9.81□□□□□ -0.84
Ttc28Q80XJ3 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC9.81□□□□□ -0.84
Ttc28Q80XJ3 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Ttc28Q80XJ3 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Ttc28Q80XJ3 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ttc28Q80XJ3 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Ttc28Q80XJ3 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ttc28Q80XJ3 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ttc28Q80XJ3 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ttc28Q80XJ3 Matr3-216ENSMUST00000190653 1846 ntTSL 5 BASIC9.81□□□□□ -0.84
Ttc28Q80XJ3 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC9.81□□□□□ -0.84
Ttc28Q80XJ3 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Ttc28Q80XJ3 Zfp125-201ENSMUST00000079237 2488 ntBASIC9.81□□□□□ -0.84
Ttc28Q80XJ3 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ttc28Q80XJ3 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ttc28Q80XJ3 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ttc28Q80XJ3 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
Ttc28Q80XJ3 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ttc28Q80XJ3 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC9.8□□□□□ -0.84
Ttc28Q80XJ3 Gm13267-202ENSMUST00000150099 281 ntTSL 2 BASIC9.8□□□□□ -0.84
Ttc28Q80XJ3 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ttc28Q80XJ3 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC9.8□□□□□ -0.84
Ttc28Q80XJ3 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Ttc28Q80XJ3 Gm43249-201ENSMUST00000200464 458 ntBASIC9.8□□□□□ -0.84
Ttc28Q80XJ3 AC098716.1-201ENSMUST00000213527 703 ntBASIC9.8□□□□□ -0.84
Ttc28Q80XJ3 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ttc28Q80XJ3 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ttc28Q80XJ3 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ttc28Q80XJ3 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Ttc28Q80XJ3 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ttc28Q80XJ3 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Ttc28Q80XJ3 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ttc28Q80XJ3 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Ttc28Q80XJ3 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Ttc28Q80XJ3 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC9.8□□□□□ -0.84
Ttc28Q80XJ3 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ttc28Q80XJ3 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC9.8□□□□□ -0.84
Ttc28Q80XJ3 Gm31138-201ENSMUST00000212296 1705 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Ttc28Q80XJ3 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Ttc28Q80XJ3 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC9.8□□□□□ -0.84
Ttc28Q80XJ3 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Ttc28Q80XJ3 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Ttc28Q80XJ3 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ttc28Q80XJ3 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ttc28Q80XJ3 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Ttc28Q80XJ3 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC9.8□□□□□ -0.84
Ttc28Q80XJ3 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ttc28Q80XJ3 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC9.8□□□□□ -0.84
Ttc28Q80XJ3 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ttc28Q80XJ3 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Ttc28Q80XJ3 AC165351.1-201ENSMUST00000219078 2020 ntBASIC9.8□□□□□ -0.84
Ttc28Q80XJ3 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ttc28Q80XJ3 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ttc28Q80XJ3 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ttc28Q80XJ3 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC9.8□□□□□ -0.84
Ttc28Q80XJ3 Gm13039-201ENSMUST00000118638 794 ntBASIC9.8□□□□□ -0.84
Ttc28Q80XJ3 Gm12684-201ENSMUST00000118675 999 ntBASIC9.8□□□□□ -0.84
Ttc28Q80XJ3 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC9.8□□□□□ -0.84
Ttc28Q80XJ3 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC9.8□□□□□ -0.84
Ttc28Q80XJ3 Gm12906-201ENSMUST00000154610 441 ntBASIC9.8□□□□□ -0.84
Ttc28Q80XJ3 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC9.8□□□□□ -0.84
Ttc28Q80XJ3 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ttc28Q80XJ3 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC9.8□□□□□ -0.84
Ttc28Q80XJ3 Gm18035-201ENSMUST00000211962 589 ntBASIC9.8□□□□□ -0.84
Ttc28Q80XJ3 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ttc28Q80XJ3 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Ttc28Q80XJ3 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ttc28Q80XJ3 AC093022.4-203ENSMUST00000228523 2657 ntBASIC9.8□□□□□ -0.84
Ttc28Q80XJ3 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ttc28Q80XJ3 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Ttc28Q80XJ3 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Ttc28Q80XJ3 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ttc28Q80XJ3 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms