Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Gm22133-201ENSMUST00000102082 109 ntBASIC11.5□□□□□ -0.57
Ccdc116Q80X53 Gm13350-201ENSMUST00000120519 479 ntBASIC11.5□□□□□ -0.57
Ccdc116Q80X53 Gm13665-201ENSMUST00000120830 528 ntBASIC11.5□□□□□ -0.57
Ccdc116Q80X53 Gm12715-201ENSMUST00000121430 1128 ntBASIC11.5□□□□□ -0.57
Ccdc116Q80X53 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.5□□□□□ -0.57
Ccdc116Q80X53 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc116Q80X53 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc116Q80X53 Gm4310-201ENSMUST00000177847 889 ntBASIC11.5□□□□□ -0.57
Ccdc116Q80X53 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc116Q80X53 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc116Q80X53 Gm27530-201ENSMUST00000184096 98 ntBASIC11.5□□□□□ -0.57
Ccdc116Q80X53 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc116Q80X53 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC11.5□□□□□ -0.57
Ccdc116Q80X53 Aprt-ps-201ENSMUST00000212311 505 ntBASIC11.5□□□□□ -0.57
Ccdc116Q80X53 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc116Q80X53 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc116Q80X53 Gm10254-201ENSMUST00000052888 867 ntBASIC11.5□□□□□ -0.57
Ccdc116Q80X53 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc116Q80X53 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc116Q80X53 Gm8420-201ENSMUST00000097103 598 ntBASIC11.5□□□□□ -0.57
Ccdc116Q80X53 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Ccdc116Q80X53 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Ccdc116Q80X53 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Ccdc116Q80X53 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc116Q80X53 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Ccdc116Q80X53 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc116Q80X53 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.5□□□□□ -0.57
Ccdc116Q80X53 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc116Q80X53 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc116Q80X53 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.5□□□□□ -0.57
Ccdc116Q80X53 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Ccdc116Q80X53 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Ccdc116Q80X53 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Ccdc116Q80X53 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc116Q80X53 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc116Q80X53 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.5□□□□□ -0.57
Ccdc116Q80X53 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.5□□□□□ -0.57
Ccdc116Q80X53 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc116Q80X53 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc116Q80X53 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc116Q80X53 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.5□□□□□ -0.57
Ccdc116Q80X53 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc116Q80X53 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc116Q80X53 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc116Q80X53 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc116Q80X53 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC11.49□□□□□ -0.57
Ccdc116Q80X53 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc116Q80X53 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc116Q80X53 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc116Q80X53 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc116Q80X53 Gm10548-201ENSMUST00000097631 2629 ntBASIC11.49□□□□□ -0.57
Ccdc116Q80X53 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc116Q80X53 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc116Q80X53 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc116Q80X53 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Ccdc116Q80X53 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Ccdc116Q80X53 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Ccdc116Q80X53 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc116Q80X53 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Ccdc116Q80X53 Gm7003-201ENSMUST00000195089 312 ntBASIC11.49□□□□□ -0.57
Ccdc116Q80X53 Gm17812-201ENSMUST00000204935 318 ntBASIC11.49□□□□□ -0.57
Ccdc116Q80X53 Gm9797-202ENSMUST00000218003 294 ntBASIC11.49□□□□□ -0.57
Ccdc116Q80X53 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc116Q80X53 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC11.49□□□□□ -0.57
Ccdc116Q80X53 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.49□□□□□ -0.57
Ccdc116Q80X53 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Ccdc116Q80X53 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc116Q80X53 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc116Q80X53 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.49□□□□□ -0.57
Ccdc116Q80X53 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Ccdc116Q80X53 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc116Q80X53 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc116Q80X53 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc116Q80X53 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.49□□□□□ -0.57
Ccdc116Q80X53 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc116Q80X53 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.49□□□□□ -0.57
Ccdc116Q80X53 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.49□□□□□ -0.57
Ccdc116Q80X53 Cts7-201ENSMUST00000021892 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc116Q80X53 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc116Q80X53 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Ccdc116Q80X53 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc116Q80X53 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc116Q80X53 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Ccdc116Q80X53 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc116Q80X53 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc116Q80X53 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Ccdc116Q80X53 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc116Q80X53 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Ccdc116Q80X53 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc116Q80X53 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc116Q80X53 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc116Q80X53 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Ccdc116Q80X53 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc116Q80X53 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc116Q80X53 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Ccdc116Q80X53 Gm13996-201ENSMUST00000118456 430 ntBASIC11.48□□□□□ -0.57
Ccdc116Q80X53 Gm12962-202ENSMUST00000144212 691 ntTSL 2 BASIC11.48□□□□□ -0.57
Ccdc116Q80X53 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc116Q80X53 Gm43371-201ENSMUST00000202838 1031 ntBASIC11.48□□□□□ -0.57
Ccdc116Q80X53 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms