Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC11.54□□□□□ -0.56
Pcdh19Q80TF3 Gm6867-201ENSMUST00000219165 425 ntBASIC11.54□□□□□ -0.56
Pcdh19Q80TF3 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC11.54□□□□□ -0.56
Pcdh19Q80TF3 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Pcdh19Q80TF3 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh19Q80TF3 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh19Q80TF3 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.54□□□□□ -0.56
Pcdh19Q80TF3 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh19Q80TF3 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.54□□□□□ -0.56
Pcdh19Q80TF3 Gm44241-201ENSMUST00000203230 1662 ntBASIC11.54□□□□□ -0.56
Pcdh19Q80TF3 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.54□□□□□ -0.56
Pcdh19Q80TF3 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh19Q80TF3 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.54□□□□□ -0.56
Pcdh19Q80TF3 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh19Q80TF3 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh19Q80TF3 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh19Q80TF3 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh19Q80TF3 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh19Q80TF3 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh19Q80TF3 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh19Q80TF3 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh19Q80TF3 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh19Q80TF3 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Pcdh19Q80TF3 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Pcdh19Q80TF3 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh19Q80TF3 Gm18198-201ENSMUST00000204986 1551 ntBASIC11.54□□□□□ -0.56
Pcdh19Q80TF3 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh19Q80TF3 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh19Q80TF3 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.54□□□□□ -0.56
Pcdh19Q80TF3 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh19Q80TF3 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh19Q80TF3 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.53□□□□□ -0.56
Pcdh19Q80TF3 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh19Q80TF3 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Pcdh19Q80TF3 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh19Q80TF3 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh19Q80TF3 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh19Q80TF3 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh19Q80TF3 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh19Q80TF3 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh19Q80TF3 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh19Q80TF3 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh19Q80TF3 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh19Q80TF3 Gm22920-201ENSMUST00000102175 109 ntBASIC11.53□□□□□ -0.56
Pcdh19Q80TF3 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh19Q80TF3 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Pcdh19Q80TF3 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh19Q80TF3 Gm15352-201ENSMUST00000118696 270 ntBASIC11.53□□□□□ -0.56
Pcdh19Q80TF3 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.53□□□□□ -0.56
Pcdh19Q80TF3 Gm11956-201ENSMUST00000119525 512 ntBASIC11.53□□□□□ -0.56
Pcdh19Q80TF3 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh19Q80TF3 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh19Q80TF3 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
Pcdh19Q80TF3 Gm23045-201ENSMUST00000175041 96 ntBASIC11.53□□□□□ -0.56
Pcdh19Q80TF3 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC11.53□□□□□ -0.56
Pcdh19Q80TF3 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC11.53□□□□□ -0.56
Pcdh19Q80TF3 Gm12407-201ENSMUST00000180219 324 ntBASIC11.53□□□□□ -0.56
Pcdh19Q80TF3 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC11.53□□□□□ -0.56
Pcdh19Q80TF3 Gm38151-201ENSMUST00000195085 289 ntBASIC11.53□□□□□ -0.56
Pcdh19Q80TF3 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC11.53□□□□□ -0.56
Pcdh19Q80TF3 Gm44126-201ENSMUST00000204831 514 ntBASIC11.53□□□□□ -0.56
Pcdh19Q80TF3 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC11.53□□□□□ -0.56
Pcdh19Q80TF3 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC11.53□□□□□ -0.56
Pcdh19Q80TF3 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Pcdh19Q80TF3 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh19Q80TF3 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh19Q80TF3 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.53□□□□□ -0.56
Pcdh19Q80TF3 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
Pcdh19Q80TF3 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh19Q80TF3 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Pcdh19Q80TF3 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Pcdh19Q80TF3 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh19Q80TF3 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh19Q80TF3 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC11.53□□□□□ -0.56
Pcdh19Q80TF3 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh19Q80TF3 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh19Q80TF3 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC11.53□□□□□ -0.56
Pcdh19Q80TF3 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Pcdh19Q80TF3 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.53□□□□□ -0.56
Pcdh19Q80TF3 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Pcdh19Q80TF3 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.52□□□□□ -0.56
Pcdh19Q80TF3 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pcdh19Q80TF3 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Pcdh19Q80TF3 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.52□□□□□ -0.56
Pcdh19Q80TF3 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pcdh19Q80TF3 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Pcdh19Q80TF3 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Pcdh19Q80TF3 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pcdh19Q80TF3 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdh19Q80TF3 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdh19Q80TF3 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdh19Q80TF3 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Pcdh19Q80TF3 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdh19Q80TF3 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdh19Q80TF3 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Pcdh19Q80TF3 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdh19Q80TF3 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC11.52□□□□□ -0.57
Pcdh19Q80TF3 Gm13888-201ENSMUST00000119148 422 ntBASIC11.52□□□□□ -0.57
Pcdh19Q80TF3 Gm11246-201ENSMUST00000120880 345 ntBASIC11.52□□□□□ -0.57
Pcdh19Q80TF3 Gm14441-201ENSMUST00000121960 540 ntBASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms