Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Snrnp40Q6PE01 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Snrnp40Q6PE01 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Snrnp40Q6PE01 Gm25554-201ENSMUST00000158075 113 ntBASIC10.31□□□□□ -0.76
Snrnp40Q6PE01 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC10.31□□□□□ -0.76
Snrnp40Q6PE01 Gm6548-201ENSMUST00000167498 1165 ntBASIC10.31□□□□□ -0.76
Snrnp40Q6PE01 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC10.31□□□□□ -0.76
Snrnp40Q6PE01 Gm9081-201ENSMUST00000182346 991 ntBASIC10.31□□□□□ -0.76
Snrnp40Q6PE01 Gm6114-201ENSMUST00000182472 968 ntBASIC10.31□□□□□ -0.76
Snrnp40Q6PE01 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC10.31□□□□□ -0.76
Snrnp40Q6PE01 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC10.31□□□□□ -0.76
Snrnp40Q6PE01 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Snrnp40Q6PE01 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC10.31□□□□□ -0.76
Snrnp40Q6PE01 Gm43912-201ENSMUST00000204352 538 ntBASIC10.31□□□□□ -0.76
Snrnp40Q6PE01 Gm5996-201ENSMUST00000211110 718 ntBASIC10.31□□□□□ -0.76
Snrnp40Q6PE01 Gm18499-201ENSMUST00000220808 1021 ntBASIC10.31□□□□□ -0.76
Snrnp40Q6PE01 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC10.31□□□□□ -0.76
Snrnp40Q6PE01 AC153152.3-201ENSMUST00000222188 1135 ntBASIC10.31□□□□□ -0.76
Snrnp40Q6PE01 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Snrnp40Q6PE01 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Snrnp40Q6PE01 CT010506.1-201ENSMUST00000223673 349 ntBASIC10.31□□□□□ -0.76
Snrnp40Q6PE01 AC130477.1-201ENSMUST00000226982 420 ntBASIC10.31□□□□□ -0.76
Snrnp40Q6PE01 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Snrnp40Q6PE01 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Snrnp40Q6PE01 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Snrnp40Q6PE01 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC10.31□□□□□ -0.76
Snrnp40Q6PE01 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Snrnp40Q6PE01 AC093022.4-203ENSMUST00000228523 2657 ntBASIC10.31□□□□□ -0.76
Snrnp40Q6PE01 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC10.31□□□□□ -0.76
Snrnp40Q6PE01 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Snrnp40Q6PE01 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Snrnp40Q6PE01 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Snrnp40Q6PE01 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Snrnp40Q6PE01 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Snrnp40Q6PE01 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Snrnp40Q6PE01 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Snrnp40Q6PE01 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Snrnp40Q6PE01 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Snrnp40Q6PE01 Gm8899-201ENSMUST00000214635 1332 ntBASIC10.31□□□□□ -0.76
Snrnp40Q6PE01 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC10.31□□□□□ -0.76
Snrnp40Q6PE01 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Snrnp40Q6PE01 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Snrnp40Q6PE01 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC10.3□□□□□ -0.76
Snrnp40Q6PE01 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Snrnp40Q6PE01 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Snrnp40Q6PE01 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Snrnp40Q6PE01 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Snrnp40Q6PE01 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Snrnp40Q6PE01 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC10.3□□□□□ -0.76
Snrnp40Q6PE01 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC10.3□□□□□ -0.76
Snrnp40Q6PE01 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC10.3□□□□□ -0.76
Snrnp40Q6PE01 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Snrnp40Q6PE01 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC10.3□□□□□ -0.76
Snrnp40Q6PE01 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Snrnp40Q6PE01 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Snrnp40Q6PE01 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC10.3□□□□□ -0.76
Snrnp40Q6PE01 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Snrnp40Q6PE01 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Snrnp40Q6PE01 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Snrnp40Q6PE01 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Snrnp40Q6PE01 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Snrnp40Q6PE01 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Snrnp40Q6PE01 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
Snrnp40Q6PE01 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC10.3□□□□□ -0.76
Snrnp40Q6PE01 Gm14993-201ENSMUST00000121180 164 ntBASIC10.3□□□□□ -0.76
Snrnp40Q6PE01 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC10.3□□□□□ -0.76
Snrnp40Q6PE01 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC10.3□□□□□ -0.76
Snrnp40Q6PE01 Gm22846-201ENSMUST00000157706 270 ntBASIC10.3□□□□□ -0.76
Snrnp40Q6PE01 Gm17214-201ENSMUST00000164501 541 ntBASIC10.3□□□□□ -0.76
Snrnp40Q6PE01 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Snrnp40Q6PE01 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Snrnp40Q6PE01 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Snrnp40Q6PE01 Gm5700-201ENSMUST00000191483 989 ntBASIC10.3□□□□□ -0.76
Snrnp40Q6PE01 Ighv1-2-201ENSMUST00000195325 378 ntBASIC10.3□□□□□ -0.76
Snrnp40Q6PE01 Gm5870-201ENSMUST00000196461 282 ntBASIC10.3□□□□□ -0.76
Snrnp40Q6PE01 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC10.3□□□□□ -0.76
Snrnp40Q6PE01 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Snrnp40Q6PE01 Gm42655-201ENSMUST00000202782 1134 ntBASIC10.3□□□□□ -0.76
Snrnp40Q6PE01 Gm17825-201ENSMUST00000206836 794 ntBASIC10.3□□□□□ -0.76
Snrnp40Q6PE01 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC10.3□□□□□ -0.76
Snrnp40Q6PE01 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Snrnp40Q6PE01 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Snrnp40Q6PE01 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Snrnp40Q6PE01 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Snrnp40Q6PE01 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Snrnp40Q6PE01 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Snrnp40Q6PE01 Gm8522-201ENSMUST00000118416 1929 ntBASIC10.3□□□□□ -0.76
Snrnp40Q6PE01 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Snrnp40Q6PE01 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Snrnp40Q6PE01 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Snrnp40Q6PE01 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Snrnp40Q6PE01 Gm10305-201ENSMUST00000195331 2475 ntBASIC10.3□□□□□ -0.76
Snrnp40Q6PE01 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Snrnp40Q6PE01 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC10.3□□□□□ -0.76
Snrnp40Q6PE01 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC10.3□□□□□ -0.76
Snrnp40Q6PE01 Gm37600-201ENSMUST00000193764 3292 ntBASIC10.3□□□□□ -0.76
Snrnp40Q6PE01 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Snrnp40Q6PE01 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC10.3□□□□□ -0.76
Snrnp40Q6PE01 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Snrnp40Q6PE01 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms