Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Sh3rf1Q69ZI1 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sh3rf1Q69ZI1 Clec4d-201ENSMUST00000032240 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sh3rf1Q69ZI1 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sh3rf1Q69ZI1 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.91□□□□□ -0.5
Sh3rf1Q69ZI1 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sh3rf1Q69ZI1 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sh3rf1Q69ZI1 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sh3rf1Q69ZI1 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sh3rf1Q69ZI1 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Sh3rf1Q69ZI1 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sh3rf1Q69ZI1 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sh3rf1Q69ZI1 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sh3rf1Q69ZI1 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC11.91□□□□□ -0.5
Sh3rf1Q69ZI1 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sh3rf1Q69ZI1 Gm24845-201ENSMUST00000158034 109 ntBASIC11.91□□□□□ -0.5
Sh3rf1Q69ZI1 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sh3rf1Q69ZI1 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC11.91□□□□□ -0.5
Sh3rf1Q69ZI1 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.91□□□□□ -0.5
Sh3rf1Q69ZI1 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC11.91□□□□□ -0.5
Sh3rf1Q69ZI1 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sh3rf1Q69ZI1 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Sh3rf1Q69ZI1 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC11.91□□□□□ -0.5
Sh3rf1Q69ZI1 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sh3rf1Q69ZI1 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.91□□□□□ -0.5
Sh3rf1Q69ZI1 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.91□□□□□ -0.5
Sh3rf1Q69ZI1 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sh3rf1Q69ZI1 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sh3rf1Q69ZI1 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sh3rf1Q69ZI1 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.91□□□□□ -0.5
Sh3rf1Q69ZI1 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sh3rf1Q69ZI1 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Sh3rf1Q69ZI1 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Sh3rf1Q69ZI1 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Sh3rf1Q69ZI1 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sh3rf1Q69ZI1 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sh3rf1Q69ZI1 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sh3rf1Q69ZI1 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sh3rf1Q69ZI1 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Sh3rf1Q69ZI1 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sh3rf1Q69ZI1 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Sh3rf1Q69ZI1 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sh3rf1Q69ZI1 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC11.9□□□□□ -0.5
Sh3rf1Q69ZI1 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sh3rf1Q69ZI1 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sh3rf1Q69ZI1 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sh3rf1Q69ZI1 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sh3rf1Q69ZI1 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sh3rf1Q69ZI1 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sh3rf1Q69ZI1 Gm3836-201ENSMUST00000211377 1613 ntBASIC11.9□□□□□ -0.5
Sh3rf1Q69ZI1 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sh3rf1Q69ZI1 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sh3rf1Q69ZI1 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sh3rf1Q69ZI1 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sh3rf1Q69ZI1 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Sh3rf1Q69ZI1 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sh3rf1Q69ZI1 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Sh3rf1Q69ZI1 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sh3rf1Q69ZI1 Gm13296-201ENSMUST00000117854 997 ntBASIC11.9□□□□□ -0.5
Sh3rf1Q69ZI1 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sh3rf1Q69ZI1 Gm12036-201ENSMUST00000120008 530 ntBASIC11.9□□□□□ -0.5
Sh3rf1Q69ZI1 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.9□□□□□ -0.5
Sh3rf1Q69ZI1 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sh3rf1Q69ZI1 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC11.9□□□□□ -0.5
Sh3rf1Q69ZI1 Gm25732-201ENSMUST00000175168 60 ntBASIC11.9□□□□□ -0.5
Sh3rf1Q69ZI1 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sh3rf1Q69ZI1 Gm42997-202ENSMUST00000200321 985 ntBASIC11.9□□□□□ -0.5
Sh3rf1Q69ZI1 Gm8913-201ENSMUST00000209491 641 ntBASIC11.9□□□□□ -0.5
Sh3rf1Q69ZI1 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sh3rf1Q69ZI1 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.9□□□□□ -0.5
Sh3rf1Q69ZI1 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sh3rf1Q69ZI1 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Sh3rf1Q69ZI1 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Sh3rf1Q69ZI1 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sh3rf1Q69ZI1 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Sh3rf1Q69ZI1 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sh3rf1Q69ZI1 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sh3rf1Q69ZI1 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sh3rf1Q69ZI1 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Sh3rf1Q69ZI1 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.9□□□□□ -0.5
Sh3rf1Q69ZI1 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sh3rf1Q69ZI1 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sh3rf1Q69ZI1 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sh3rf1Q69ZI1 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sh3rf1Q69ZI1 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sh3rf1Q69ZI1 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sh3rf1Q69ZI1 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sh3rf1Q69ZI1 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Sh3rf1Q69ZI1 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.9□□□□□ -0.51
Sh3rf1Q69ZI1 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.9□□□□□ -0.51
Sh3rf1Q69ZI1 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Sh3rf1Q69ZI1 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Sh3rf1Q69ZI1 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Sh3rf1Q69ZI1 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sh3rf1Q69ZI1 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sh3rf1Q69ZI1 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Sh3rf1Q69ZI1 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sh3rf1Q69ZI1 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sh3rf1Q69ZI1 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sh3rf1Q69ZI1 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms