Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Scube3Q66PY1 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.4
Scube3Q66PY1 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Scube3Q66PY1 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Scube3Q66PY1 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
Scube3Q66PY1 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.52□□□□□ -0.4
Scube3Q66PY1 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Scube3Q66PY1 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.52□□□□□ -0.4
Scube3Q66PY1 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
Scube3Q66PY1 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Scube3Q66PY1 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Scube3Q66PY1 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Scube3Q66PY1 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.52□□□□□ -0.4
Scube3Q66PY1 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Scube3Q66PY1 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.4
Scube3Q66PY1 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scube3Q66PY1 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.52□□□□□ -0.41
Scube3Q66PY1 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC12.52□□□□□ -0.41
Scube3Q66PY1 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
Scube3Q66PY1 Prl8a6-203ENSMUST00000110355 843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scube3Q66PY1 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC12.52□□□□□ -0.41
Scube3Q66PY1 Dcpp3-201ENSMUST00000115428 610 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Scube3Q66PY1 Gm15515-201ENSMUST00000117827 822 ntBASIC12.52□□□□□ -0.41
Scube3Q66PY1 Gm16044-201ENSMUST00000118475 450 ntBASIC12.52□□□□□ -0.41
Scube3Q66PY1 Gm13744-201ENSMUST00000118953 850 ntBASIC12.52□□□□□ -0.41
Scube3Q66PY1 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.52□□□□□ -0.41
Scube3Q66PY1 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC12.52□□□□□ -0.41
Scube3Q66PY1 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scube3Q66PY1 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Scube3Q66PY1 Cd63-ps-202ENSMUST00000154992 717 ntBASIC12.52□□□□□ -0.41
Scube3Q66PY1 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC12.52□□□□□ -0.41
Scube3Q66PY1 Mir5120-201ENSMUST00000175020 78 ntBASIC12.52□□□□□ -0.41
Scube3Q66PY1 Gm25732-201ENSMUST00000175168 60 ntBASIC12.52□□□□□ -0.41
Scube3Q66PY1 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.52□□□□□ -0.41
Scube3Q66PY1 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.52□□□□□ -0.41
Scube3Q66PY1 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Scube3Q66PY1 Gm34767-201ENSMUST00000191813 1062 ntBASIC12.52□□□□□ -0.41
Scube3Q66PY1 C030032O16Rik-201ENSMUST00000196427 716 ntBASIC12.52□□□□□ -0.41
Scube3Q66PY1 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Scube3Q66PY1 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.52□□□□□ -0.41
Scube3Q66PY1 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Scube3Q66PY1 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC12.52□□□□□ -0.41
Scube3Q66PY1 9430031K09Rik-201ENSMUST00000222913 925 ntBASIC12.52□□□□□ -0.41
Scube3Q66PY1 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12.52□□□□□ -0.41
Scube3Q66PY1 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Scube3Q66PY1 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scube3Q66PY1 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC12.52□□□□□ -0.41
Scube3Q66PY1 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Scube3Q66PY1 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Scube3Q66PY1 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scube3Q66PY1 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scube3Q66PY1 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Scube3Q66PY1 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scube3Q66PY1 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scube3Q66PY1 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.52□□□□□ -0.41
Scube3Q66PY1 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scube3Q66PY1 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scube3Q66PY1 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scube3Q66PY1 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scube3Q66PY1 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scube3Q66PY1 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.51□□□□□ -0.41
Scube3Q66PY1 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scube3Q66PY1 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scube3Q66PY1 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scube3Q66PY1 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scube3Q66PY1 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.51□□□□□ -0.41
Scube3Q66PY1 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scube3Q66PY1 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Scube3Q66PY1 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scube3Q66PY1 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.51□□□□□ -0.41
Scube3Q66PY1 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Scube3Q66PY1 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scube3Q66PY1 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.51□□□□□ -0.41
Scube3Q66PY1 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC12.51□□□□□ -0.41
Scube3Q66PY1 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Scube3Q66PY1 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.51□□□□□ -0.41
Scube3Q66PY1 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scube3Q66PY1 Gm24590-201ENSMUST00000116699 119 ntBASIC12.51□□□□□ -0.41
Scube3Q66PY1 Gm12196-201ENSMUST00000120954 262 ntBASIC12.51□□□□□ -0.41
Scube3Q66PY1 B9d1os-201ENSMUST00000137010 674 ntBASIC12.51□□□□□ -0.41
Scube3Q66PY1 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Scube3Q66PY1 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Scube3Q66PY1 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC12.51□□□□□ -0.41
Scube3Q66PY1 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.51□□□□□ -0.41
Scube3Q66PY1 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC12.51□□□□□ -0.41
Scube3Q66PY1 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.51□□□□□ -0.41
Scube3Q66PY1 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Scube3Q66PY1 Gm16617-201ENSMUST00000181008 675 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Scube3Q66PY1 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.51□□□□□ -0.41
Scube3Q66PY1 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.51□□□□□ -0.41
Scube3Q66PY1 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Scube3Q66PY1 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC12.51□□□□□ -0.41
Scube3Q66PY1 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Scube3Q66PY1 Gm44061-201ENSMUST00000203962 1195 ntBASIC12.51□□□□□ -0.41
Scube3Q66PY1 AC154424.1-201ENSMUST00000225883 799 ntBASIC12.51□□□□□ -0.41
Scube3Q66PY1 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scube3Q66PY1 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Scube3Q66PY1 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scube3Q66PY1 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Scube3Q66PY1 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms