Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Scn9aQ62205 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Scn9aQ62205 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scn9aQ62205 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Scn9aQ62205 Gm5395-201ENSMUST00000121650 915 ntBASIC13.55□□□□□ -0.24
Scn9aQ62205 Gm12666-201ENSMUST00000123179 764 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Scn9aQ62205 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Scn9aQ62205 Gm25343-201ENSMUST00000157460 107 ntBASIC13.55□□□□□ -0.24
Scn9aQ62205 Olfml3-204ENSMUST00000169286 874 ntBASIC13.55□□□□□ -0.24
Scn9aQ62205 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Scn9aQ62205 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
Scn9aQ62205 Gm29304-201ENSMUST00000186555 695 ntBASIC13.55□□□□□ -0.24
Scn9aQ62205 Gm29223-201ENSMUST00000188867 695 ntBASIC13.55□□□□□ -0.24
Scn9aQ62205 Gm37921-201ENSMUST00000194333 695 ntBASIC13.55□□□□□ -0.24
Scn9aQ62205 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC13.55□□□□□ -0.24
Scn9aQ62205 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC13.55□□□□□ -0.24
Scn9aQ62205 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC13.55□□□□□ -0.24
Scn9aQ62205 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scn9aQ62205 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Scn9aQ62205 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC13.55□□□□□ -0.24
Scn9aQ62205 Olfr1313-201ENSMUST00000099599 938 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Scn9aQ62205 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Scn9aQ62205 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Scn9aQ62205 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scn9aQ62205 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Scn9aQ62205 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scn9aQ62205 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
Scn9aQ62205 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scn9aQ62205 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Scn9aQ62205 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scn9aQ62205 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scn9aQ62205 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Scn9aQ62205 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scn9aQ62205 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scn9aQ62205 Prss23os-202ENSMUST00000179361 1362 ntBASIC13.55□□□□□ -0.24
Scn9aQ62205 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scn9aQ62205 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scn9aQ62205 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Scn9aQ62205 Tmem91-203ENSMUST00000108405 550 ntTSL 3 BASIC13.54□□□□□ -0.24
Scn9aQ62205 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn9aQ62205 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC13.54□□□□□ -0.24
Scn9aQ62205 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC13.54□□□□□ -0.24
Scn9aQ62205 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC13.54□□□□□ -0.24
Scn9aQ62205 2610318N02Rik-202ENSMUST00000207116 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn9aQ62205 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC13.54□□□□□ -0.24
Scn9aQ62205 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Scn9aQ62205 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn9aQ62205 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn9aQ62205 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn9aQ62205 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn9aQ62205 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn9aQ62205 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn9aQ62205 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn9aQ62205 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Scn9aQ62205 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Scn9aQ62205 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Scn9aQ62205 Gm5171-201ENSMUST00000214944 1415 ntBASIC13.54□□□□□ -0.24
Scn9aQ62205 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Scn9aQ62205 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Scn9aQ62205 Gm37014-201ENSMUST00000194723 2253 ntBASIC13.54□□□□□ -0.24
Scn9aQ62205 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Scn9aQ62205 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Scn9aQ62205 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn9aQ62205 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn9aQ62205 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Scn9aQ62205 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
Scn9aQ62205 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Scn9aQ62205 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn9aQ62205 Gm19013-201ENSMUST00000183895 1222 ntBASIC13.54□□□□□ -0.24
Scn9aQ62205 Gm19014-201ENSMUST00000184828 1189 ntBASIC13.54□□□□□ -0.24
Scn9aQ62205 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC13.54□□□□□ -0.24
Scn9aQ62205 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC13.54□□□□□ -0.24
Scn9aQ62205 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn9aQ62205 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Scn9aQ62205 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn9aQ62205 Fam114a2-202ENSMUST00000108850 1765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn9aQ62205 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn9aQ62205 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn9aQ62205 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scn9aQ62205 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scn9aQ62205 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.53□□□□□ -0.24
Scn9aQ62205 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.53□□□□□ -0.24
Scn9aQ62205 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scn9aQ62205 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Scn9aQ62205 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scn9aQ62205 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scn9aQ62205 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scn9aQ62205 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Scn9aQ62205 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Scn9aQ62205 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Scn9aQ62205 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Scn9aQ62205 Gm23595-201ENSMUST00000104306 130 ntBASIC13.53□□□□□ -0.24
Scn9aQ62205 Gm8019-201ENSMUST00000119317 587 ntBASIC13.53□□□□□ -0.24
Scn9aQ62205 Gm11700-201ENSMUST00000119409 403 ntBASIC13.53□□□□□ -0.24
Scn9aQ62205 Gm8152-201ENSMUST00000120842 637 ntBASIC13.53□□□□□ -0.24
Scn9aQ62205 Gm22344-201ENSMUST00000122642 278 ntBASIC13.53□□□□□ -0.24
Scn9aQ62205 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Scn9aQ62205 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Scn9aQ62205 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scn9aQ62205 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms