Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.92□□□□□ -0.34
Ift88Q61371 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ift88Q61371 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.92□□□□□ -0.34
Ift88Q61371 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.92□□□□□ -0.34
Ift88Q61371 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.92□□□□□ -0.34
Ift88Q61371 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ift88Q61371 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ift88Q61371 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ift88Q61371 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ift88Q61371 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ift88Q61371 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ift88Q61371 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC12.92□□□□□ -0.34
Ift88Q61371 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ift88Q61371 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.92□□□□□ -0.34
Ift88Q61371 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC12.92□□□□□ -0.34
Ift88Q61371 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ift88Q61371 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ift88Q61371 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ift88Q61371 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ift88Q61371 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ift88Q61371 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ift88Q61371 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ift88Q61371 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Ift88Q61371 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.92□□□□□ -0.34
Ift88Q61371 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ift88Q61371 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ift88Q61371 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Ift88Q61371 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ift88Q61371 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ift88Q61371 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ift88Q61371 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ift88Q61371 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ift88Q61371 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ift88Q61371 Gm8062-201ENSMUST00000139696 444 ntBASIC12.91□□□□□ -0.34
Ift88Q61371 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.91□□□□□ -0.34
Ift88Q61371 Gm43433-201ENSMUST00000196573 481 ntBASIC12.91□□□□□ -0.34
Ift88Q61371 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.91□□□□□ -0.34
Ift88Q61371 Gm45598-202ENSMUST00000210719 986 ntBASIC12.91□□□□□ -0.34
Ift88Q61371 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.91□□□□□ -0.34
Ift88Q61371 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.91□□□□□ -0.34
Ift88Q61371 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ift88Q61371 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ift88Q61371 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Ift88Q61371 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ift88Q61371 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Ift88Q61371 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ift88Q61371 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Ift88Q61371 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Ift88Q61371 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC12.91□□□□□ -0.34
Ift88Q61371 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ift88Q61371 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ift88Q61371 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ift88Q61371 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC12.91□□□□□ -0.34
Ift88Q61371 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ift88Q61371 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ift88Q61371 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.91□□□□□ -0.34
Ift88Q61371 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ift88Q61371 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.91□□□□□ -0.34
Ift88Q61371 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Ift88Q61371 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ift88Q61371 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ift88Q61371 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ift88Q61371 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Ift88Q61371 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ift88Q61371 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ift88Q61371 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ift88Q61371 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ift88Q61371 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ift88Q61371 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ift88Q61371 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ift88Q61371 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ift88Q61371 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ift88Q61371 Gm14726-201ENSMUST00000120623 896 ntBASIC12.9□□□□□ -0.34
Ift88Q61371 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Ift88Q61371 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC12.9□□□□□ -0.34
Ift88Q61371 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ift88Q61371 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Ift88Q61371 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.9□□□□□ -0.34
Ift88Q61371 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.9□□□□□ -0.34
Ift88Q61371 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ift88Q61371 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.9□□□□□ -0.34
Ift88Q61371 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ift88Q61371 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ift88Q61371 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ift88Q61371 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ift88Q61371 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ift88Q61371 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ift88Q61371 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ift88Q61371 BC043934-202ENSMUST00000185694 2356 ntBASIC12.89□□□□□ -0.35
Ift88Q61371 Gm36940-201ENSMUST00000194281 2036 ntBASIC12.89□□□□□ -0.35
Ift88Q61371 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
Ift88Q61371 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Ift88Q61371 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
Ift88Q61371 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ift88Q61371 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Ift88Q61371 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Ift88Q61371 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ift88Q61371 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ift88Q61371 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ift88Q61371 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms