Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col12a1Q60847 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.25□□□□□ -0.61
Col12a1Q60847 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col12a1Q60847 Ighv5-1-201ENSMUST00000193324 353 ntBASIC11.25□□□□□ -0.61
Col12a1Q60847 Gm42687-201ENSMUST00000199075 164 ntBASIC11.25□□□□□ -0.61
Col12a1Q60847 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col12a1Q60847 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col12a1Q60847 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col12a1Q60847 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col12a1Q60847 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC11.25□□□□□ -0.61
Col12a1Q60847 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Col12a1Q60847 Stard6-206ENSMUST00000174118 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col12a1Q60847 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC11.24□□□□□ -0.61
Col12a1Q60847 Fut1-202ENSMUST00000209379 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col12a1Q60847 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col12a1Q60847 Rps9-201ENSMUST00000006496 751 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col12a1Q60847 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Col12a1Q60847 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col12a1Q60847 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col12a1Q60847 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col12a1Q60847 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.24□□□□□ -0.61
Col12a1Q60847 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Col12a1Q60847 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col12a1Q60847 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col12a1Q60847 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.24□□□□□ -0.61
Col12a1Q60847 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC11.24□□□□□ -0.61
Col12a1Q60847 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Col12a1Q60847 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col12a1Q60847 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Col12a1Q60847 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC11.24□□□□□ -0.61
Col12a1Q60847 Psme2-201ENSMUST00000111378 795 ntTSL 5 BASIC11.24□□□□□ -0.61
Col12a1Q60847 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Col12a1Q60847 2700099C18Rik-203ENSMUST00000182475 969 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Col12a1Q60847 Gm18014-201ENSMUST00000183369 817 ntBASIC11.24□□□□□ -0.61
Col12a1Q60847 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC11.24□□□□□ -0.61
Col12a1Q60847 Gm37009-201ENSMUST00000193297 361 ntBASIC11.24□□□□□ -0.61
Col12a1Q60847 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC11.24□□□□□ -0.61
Col12a1Q60847 4933407I05Rik-202ENSMUST00000213467 420 ntTSL 2 BASIC11.24□□□□□ -0.61
Col12a1Q60847 Gm6859-201ENSMUST00000218614 989 ntBASIC11.24□□□□□ -0.61
Col12a1Q60847 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.24□□□□□ -0.61
Col12a1Q60847 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Col12a1Q60847 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col12a1Q60847 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col12a1Q60847 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col12a1Q60847 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col12a1Q60847 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col12a1Q60847 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Col12a1Q60847 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC11.24□□□□□ -0.61
Col12a1Q60847 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col12a1Q60847 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Col12a1Q60847 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col12a1Q60847 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col12a1Q60847 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col12a1Q60847 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col12a1Q60847 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col12a1Q60847 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Col12a1Q60847 Gm14699-201ENSMUST00000122340 228 ntBASIC11.24□□□□□ -0.61
Col12a1Q60847 Gm2663-201ENSMUST00000166306 862 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col12a1Q60847 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col12a1Q60847 1700019D03Rik-207ENSMUST00000191441 638 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
Col12a1Q60847 Rassf6-205ENSMUST00000202704 1178 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
Col12a1Q60847 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Col12a1Q60847 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col12a1Q60847 Gm44939-201ENSMUST00000206939 814 ntTSL 3 BASIC11.24□□□□□ -0.61
Col12a1Q60847 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.24□□□□□ -0.61
Col12a1Q60847 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col12a1Q60847 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col12a1Q60847 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col12a1Q60847 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col12a1Q60847 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Col12a1Q60847 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Col12a1Q60847 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col12a1Q60847 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col12a1Q60847 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col12a1Q60847 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col12a1Q60847 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Col12a1Q60847 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Col12a1Q60847 AC192333.3-201ENSMUST00000224041 463 ntBASIC11.23□□□□□ -0.61
Col12a1Q60847 Gm5278-201ENSMUST00000055957 552 ntBASIC11.23□□□□□ -0.61
Col12a1Q60847 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.23□□□□□ -0.61
Col12a1Q60847 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col12a1Q60847 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col12a1Q60847 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col12a1Q60847 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Col12a1Q60847 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC11.23□□□□□ -0.61
Col12a1Q60847 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.23□□□□□ -0.61
Col12a1Q60847 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Col12a1Q60847 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col12a1Q60847 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col12a1Q60847 Spef2-203ENSMUST00000159368 1422 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Col12a1Q60847 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col12a1Q60847 Cryzl1-202ENSMUST00000114023 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col12a1Q60847 Cryzl1-206ENSMUST00000124282 1187 ntTSL 5 BASIC11.23□□□□□ -0.61
Col12a1Q60847 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Col12a1Q60847 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.23□□□□□ -0.61
Col12a1Q60847 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Col12a1Q60847 Rpl15-ps2-201ENSMUST00000184247 613 ntBASIC11.23□□□□□ -0.61
Col12a1Q60847 Cpsf4l-201ENSMUST00000018871 1235 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Col12a1Q60847 Fxyd1-201ENSMUST00000039909 620 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Col12a1Q60847 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms