Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
Trav3-3Q5R1C3 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
Trav3-3Q5R1C3 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC8.78□□□□□ -1
Trav3-3Q5R1C3 Prdm16-205ENSMUST00000105637 8595 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Trav3-3Q5R1C3 Prdm16-201ENSMUST00000030902 8598 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
Trav3-3Q5R1C3 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trav3-3Q5R1C3 Dchs2-201ENSMUST00000191829 10783 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Trav3-3Q5R1C3 Asxl2-207ENSMUST00000153102 4462 ntAPPRIS P2 TSL 5 BASIC8.78□□□□□ -1
Trav3-3Q5R1C3 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
Trav3-3Q5R1C3 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC8.78□□□□□ -1
Trav3-3Q5R1C3 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC8.78□□□□□ -1
Trav3-3Q5R1C3 Gm13689-201ENSMUST00000119360 685 ntBASIC8.78□□□□□ -1
Trav3-3Q5R1C3 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC8.78□□□□□ -1
Trav3-3Q5R1C3 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC8.78□□□□□ -1
Trav3-3Q5R1C3 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC8.78□□□□□ -1
Trav3-3Q5R1C3 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC8.78□□□□□ -1
Trav3-3Q5R1C3 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
Trav3-3Q5R1C3 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC8.78□□□□□ -1
Trav3-3Q5R1C3 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC8.78□□□□□ -1
Trav3-3Q5R1C3 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trav3-3Q5R1C3 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC8.78□□□□□ -1
Trav3-3Q5R1C3 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC8.78□□□□□ -1
Trav3-3Q5R1C3 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trav3-3Q5R1C3 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC8.78□□□□□ -1
Trav3-3Q5R1C3 AC174797.1-201ENSMUST00000224339 1649 ntBASIC8.78□□□□□ -1
Trav3-3Q5R1C3 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trav3-3Q5R1C3 Nit1-201ENSMUST00000111289 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Trav3-3Q5R1C3 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trav3-3Q5R1C3 Smyd1-202ENSMUST00000114186 3292 ntTSL 1 (best) BASIC8.78□□□□□ -1
Trav3-3Q5R1C3 Fga-202ENSMUST00000166581 2587 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Trav3-3Q5R1C3 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC8.78□□□□□ -1
Trav3-3Q5R1C3 AC160405.1-201ENSMUST00000218207 1545 ntBASIC8.78□□□□□ -1
Trav3-3Q5R1C3 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trav3-3Q5R1C3 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trav3-3Q5R1C3 Gal3st2-201ENSMUST00000094663 2844 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trav3-3Q5R1C3 Gm14565-201ENSMUST00000140021 2494 ntTSL 1 (best) BASIC8.78□□□□□ -1
Trav3-3Q5R1C3 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC8.78□□□□□ -1
Trav3-3Q5R1C3 5830411N06Rik-203ENSMUST00000164583 3342 ntAPPRIS P4 TSL 1 (best) BASIC8.78□□□□□ -1
Trav3-3Q5R1C3 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC8.78□□□□□ -1
Trav3-3Q5R1C3 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
Trav3-3Q5R1C3 Gm42608-201ENSMUST00000197563 2018 ntBASIC8.78□□□□□ -1
Trav3-3Q5R1C3 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC8.78□□□□□ -1
Trav3-3Q5R1C3 Ap2b1-201ENSMUST00000018875 5625 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trav3-3Q5R1C3 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trav3-3Q5R1C3 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trav3-3Q5R1C3 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trav3-3Q5R1C3 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
Trav3-3Q5R1C3 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trav3-3Q5R1C3 Gm44798-201ENSMUST00000208123 2410 ntBASIC8.78□□□□□ -1
Trav3-3Q5R1C3 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trav3-3Q5R1C3 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC8.77□□□□□ -1
Trav3-3Q5R1C3 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Trav3-3Q5R1C3 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC8.77□□□□□ -1
Trav3-3Q5R1C3 Gm34923-201ENSMUST00000222673 5043 ntTSL 5 BASIC8.77□□□□□ -1
Trav3-3Q5R1C3 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Trav3-3Q5R1C3 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC8.77□□□□□ -1
Trav3-3Q5R1C3 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1
Trav3-3Q5R1C3 Serpinb8-202ENSMUST00000112706 4581 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trav3-3Q5R1C3 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trav3-3Q5R1C3 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trav3-3Q5R1C3 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Trav3-3Q5R1C3 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC8.77□□□□□ -1.01
Trav3-3Q5R1C3 Gm3294-201ENSMUST00000164104 7367 ntTSL 3 BASIC8.77□□□□□ -1.01
Trav3-3Q5R1C3 Bmpr2-201ENSMUST00000087435 12899 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trav3-3Q5R1C3 Gm37031-201ENSMUST00000195487 2530 ntBASIC8.77□□□□□ -1.01
Trav3-3Q5R1C3 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trav3-3Q5R1C3 Smchd1-201ENSMUST00000127430 7052 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Trav3-3Q5R1C3 Gm42741-201ENSMUST00000201340 2278 ntBASIC8.77□□□□□ -1.01
Trav3-3Q5R1C3 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Trav3-3Q5R1C3 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trav3-3Q5R1C3 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Trav3-3Q5R1C3 Ilf3-208ENSMUST00000214758 3177 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
Trav3-3Q5R1C3 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC8.77□□□□□ -1.01
Trav3-3Q5R1C3 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Trav3-3Q5R1C3 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trav3-3Q5R1C3 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Trav3-3Q5R1C3 Gm14350-201ENSMUST00000116642 640 ntBASIC8.77□□□□□ -1.01
Trav3-3Q5R1C3 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC8.77□□□□□ -1.01
Trav3-3Q5R1C3 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Trav3-3Q5R1C3 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Trav3-3Q5R1C3 Mir6392-201ENSMUST00000184924 108 ntBASIC8.77□□□□□ -1.01
Trav3-3Q5R1C3 Gm43416-201ENSMUST00000201916 1015 ntBASIC8.77□□□□□ -1.01
Trav3-3Q5R1C3 Gm18624-201ENSMUST00000220966 658 ntBASIC8.77□□□□□ -1.01
Trav3-3Q5R1C3 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trav3-3Q5R1C3 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trav3-3Q5R1C3 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Trav3-3Q5R1C3 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trav3-3Q5R1C3 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trav3-3Q5R1C3 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trav3-3Q5R1C3 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Trav3-3Q5R1C3 Ilf3-201ENSMUST00000067646 3549 ntAPPRIS P4 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trav3-3Q5R1C3 Son-202ENSMUST00000114037 8399 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trav3-3Q5R1C3 Dqx1-201ENSMUST00000077502 3257 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Trav3-3Q5R1C3 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Trav3-3Q5R1C3 Pgf-201ENSMUST00000004913 1582 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trav3-3Q5R1C3 Adcy4-201ENSMUST00000002398 3444 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trav3-3Q5R1C3 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC8.77□□□□□ -1.01
Trav3-3Q5R1C3 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trav3-3Q5R1C3 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trav3-3Q5R1C3 Agbl5-201ENSMUST00000069705 2922 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms