Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC10.81□□□□□ -0.68
Urb1Q571H0 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Urb1Q571H0 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Urb1Q571H0 Gm45856-201ENSMUST00000212752 416 ntBASIC10.81□□□□□ -0.68
Urb1Q571H0 Arhgef33-207ENSMUST00000224966 490 ntBASIC10.81□□□□□ -0.68
Urb1Q571H0 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Urb1Q571H0 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC10.81□□□□□ -0.68
Urb1Q571H0 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Urb1Q571H0 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Urb1Q571H0 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Urb1Q571H0 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Urb1Q571H0 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Urb1Q571H0 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC10.8□□□□□ -0.68
Urb1Q571H0 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Urb1Q571H0 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Urb1Q571H0 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Urb1Q571H0 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Urb1Q571H0 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Urb1Q571H0 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Urb1Q571H0 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Urb1Q571H0 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Urb1Q571H0 AC126257.1-201ENSMUST00000213195 1536 ntBASIC10.8□□□□□ -0.68
Urb1Q571H0 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Urb1Q571H0 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC10.8□□□□□ -0.68
Urb1Q571H0 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Urb1Q571H0 Gm11244-201ENSMUST00000121243 237 ntBASIC10.8□□□□□ -0.68
Urb1Q571H0 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
Urb1Q571H0 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Urb1Q571H0 Gm43912-201ENSMUST00000204352 538 ntBASIC10.8□□□□□ -0.68
Urb1Q571H0 Gm44506-201ENSMUST00000206278 965 ntBASIC10.8□□□□□ -0.68
Urb1Q571H0 Gm18514-201ENSMUST00000218980 436 ntBASIC10.8□□□□□ -0.68
Urb1Q571H0 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Urb1Q571H0 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Urb1Q571H0 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Urb1Q571H0 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Urb1Q571H0 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Urb1Q571H0 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Urb1Q571H0 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Urb1Q571H0 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Urb1Q571H0 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Urb1Q571H0 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Urb1Q571H0 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Urb1Q571H0 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Urb1Q571H0 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Urb1Q571H0 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Urb1Q571H0 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Urb1Q571H0 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Urb1Q571H0 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Urb1Q571H0 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Urb1Q571H0 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Urb1Q571H0 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Urb1Q571H0 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Urb1Q571H0 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Urb1Q571H0 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Urb1Q571H0 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Urb1Q571H0 Gm17070-201ENSMUST00000170463 784 ntBASIC10.79□□□□□ -0.68
Urb1Q571H0 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
Urb1Q571H0 Gm9507-202ENSMUST00000180157 654 ntBASIC10.79□□□□□ -0.68
Urb1Q571H0 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC10.79□□□□□ -0.68
Urb1Q571H0 Gm7504-201ENSMUST00000201449 424 ntBASIC10.79□□□□□ -0.68
Urb1Q571H0 Gm44315-201ENSMUST00000203041 219 ntBASIC10.79□□□□□ -0.68
Urb1Q571H0 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC10.79□□□□□ -0.68
Urb1Q571H0 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC10.79□□□□□ -0.68
Urb1Q571H0 AC113082.1-201ENSMUST00000217324 327 ntBASIC10.79□□□□□ -0.68
Urb1Q571H0 Gm18968-201ENSMUST00000221319 862 ntBASIC10.79□□□□□ -0.68
Urb1Q571H0 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Urb1Q571H0 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Urb1Q571H0 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC10.79□□□□□ -0.68
Urb1Q571H0 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC10.79□□□□□ -0.68
Urb1Q571H0 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Urb1Q571H0 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Urb1Q571H0 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Urb1Q571H0 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Urb1Q571H0 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Urb1Q571H0 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Urb1Q571H0 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Urb1Q571H0 AC123834.1-201ENSMUST00000225346 2043 ntBASIC10.79□□□□□ -0.68
Urb1Q571H0 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Urb1Q571H0 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Urb1Q571H0 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Urb1Q571H0 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Urb1Q571H0 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Urb1Q571H0 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Urb1Q571H0 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Urb1Q571H0 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Urb1Q571H0 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Urb1Q571H0 Gm25766-201ENSMUST00000104101 131 ntBASIC10.79□□□□□ -0.68
Urb1Q571H0 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC10.79□□□□□ -0.68
Urb1Q571H0 AC238811.4-201ENSMUST00000178019 1246 ntBASIC10.79□□□□□ -0.68
Urb1Q571H0 Gm26134-201ENSMUST00000178484 110 ntBASIC10.79□□□□□ -0.68
Urb1Q571H0 AC238940.3-201ENSMUST00000178830 1246 ntBASIC10.79□□□□□ -0.68
Urb1Q571H0 Gm34379-201ENSMUST00000195036 290 ntBASIC10.79□□□□□ -0.68
Urb1Q571H0 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Urb1Q571H0 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC10.79□□□□□ -0.68
Urb1Q571H0 Gm5451-201ENSMUST00000080545 579 ntBASIC10.79□□□□□ -0.68
Urb1Q571H0 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Urb1Q571H0 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Urb1Q571H0 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Urb1Q571H0 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Urb1Q571H0 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms