Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fam196aQ3USH1 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fam196aQ3USH1 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fam196aQ3USH1 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fam196aQ3USH1 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fam196aQ3USH1 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fam196aQ3USH1 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fam196aQ3USH1 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fam196aQ3USH1 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fam196aQ3USH1 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fam196aQ3USH1 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fam196aQ3USH1 Gm13094-201ENSMUST00000117930 409 ntBASIC11.81□□□□□ -0.52
Fam196aQ3USH1 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Fam196aQ3USH1 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fam196aQ3USH1 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Fam196aQ3USH1 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC11.81□□□□□ -0.52
Fam196aQ3USH1 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Fam196aQ3USH1 Gm4868-201ENSMUST00000164138 789 ntBASIC11.81□□□□□ -0.52
Fam196aQ3USH1 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fam196aQ3USH1 Gm8384-201ENSMUST00000190905 704 ntBASIC11.81□□□□□ -0.52
Fam196aQ3USH1 Gm18123-201ENSMUST00000210874 822 ntBASIC11.81□□□□□ -0.52
Fam196aQ3USH1 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11.81□□□□□ -0.52
Fam196aQ3USH1 Gm6331-201ENSMUST00000217890 450 ntBASIC11.81□□□□□ -0.52
Fam196aQ3USH1 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fam196aQ3USH1 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fam196aQ3USH1 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fam196aQ3USH1 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Fam196aQ3USH1 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Fam196aQ3USH1 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fam196aQ3USH1 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Fam196aQ3USH1 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fam196aQ3USH1 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fam196aQ3USH1 Gm44913-201ENSMUST00000208060 2990 ntBASIC11.81□□□□□ -0.52
Fam196aQ3USH1 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fam196aQ3USH1 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Fam196aQ3USH1 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fam196aQ3USH1 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.81□□□□□ -0.52
Fam196aQ3USH1 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fam196aQ3USH1 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.81□□□□□ -0.52
Fam196aQ3USH1 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fam196aQ3USH1 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fam196aQ3USH1 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fam196aQ3USH1 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fam196aQ3USH1 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fam196aQ3USH1 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fam196aQ3USH1 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Fam196aQ3USH1 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fam196aQ3USH1 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fam196aQ3USH1 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fam196aQ3USH1 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Fam196aQ3USH1 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fam196aQ3USH1 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fam196aQ3USH1 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.8□□□□□ -0.52
Fam196aQ3USH1 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fam196aQ3USH1 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Fam196aQ3USH1 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Fam196aQ3USH1 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fam196aQ3USH1 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fam196aQ3USH1 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Fam196aQ3USH1 Gm23745-201ENSMUST00000104230 125 ntBASIC11.8□□□□□ -0.52
Fam196aQ3USH1 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Fam196aQ3USH1 Gm17709-201ENSMUST00000174536 1096 ntBASIC11.8□□□□□ -0.52
Fam196aQ3USH1 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC11.8□□□□□ -0.52
Fam196aQ3USH1 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Fam196aQ3USH1 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC11.8□□□□□ -0.52
Fam196aQ3USH1 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC11.8□□□□□ -0.52
Fam196aQ3USH1 CT030166.5-201ENSMUST00000222249 420 ntBASIC11.8□□□□□ -0.52
Fam196aQ3USH1 AC174797.2-201ENSMUST00000225835 165 ntBASIC11.8□□□□□ -0.52
Fam196aQ3USH1 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fam196aQ3USH1 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.8□□□□□ -0.52
Fam196aQ3USH1 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Fam196aQ3USH1 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Fam196aQ3USH1 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fam196aQ3USH1 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fam196aQ3USH1 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fam196aQ3USH1 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fam196aQ3USH1 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fam196aQ3USH1 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Fam196aQ3USH1 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Fam196aQ3USH1 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Fam196aQ3USH1 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fam196aQ3USH1 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Fam196aQ3USH1 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Fam196aQ3USH1 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Fam196aQ3USH1 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Fam196aQ3USH1 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Fam196aQ3USH1 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fam196aQ3USH1 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Fam196aQ3USH1 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Fam196aQ3USH1 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fam196aQ3USH1 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fam196aQ3USH1 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fam196aQ3USH1 AC107763.1-201ENSMUST00000226082 1365 ntBASIC11.79□□□□□ -0.52
Fam196aQ3USH1 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Fam196aQ3USH1 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Fam196aQ3USH1 Gm18642-201ENSMUST00000206642 1400 ntBASIC11.79□□□□□ -0.52
Fam196aQ3USH1 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.79□□□□□ -0.52
Fam196aQ3USH1 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Fam196aQ3USH1 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Fam196aQ3USH1 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms