Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Snx27Q3UHD6 Gm18642-201ENSMUST00000206642 1400 ntBASIC12.66□□□□□ -0.38
Snx27Q3UHD6 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC12.66□□□□□ -0.38
Snx27Q3UHD6 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Snx27Q3UHD6 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC12.66□□□□□ -0.38
Snx27Q3UHD6 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Snx27Q3UHD6 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Snx27Q3UHD6 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Snx27Q3UHD6 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Snx27Q3UHD6 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC12.66□□□□□ -0.38
Snx27Q3UHD6 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Snx27Q3UHD6 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Snx27Q3UHD6 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC12.66□□□□□ -0.38
Snx27Q3UHD6 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Snx27Q3UHD6 Gm45219-201ENSMUST00000205602 465 ntBASIC12.66□□□□□ -0.38
Snx27Q3UHD6 Gm17825-201ENSMUST00000206836 794 ntBASIC12.66□□□□□ -0.38
Snx27Q3UHD6 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Snx27Q3UHD6 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Snx27Q3UHD6 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Snx27Q3UHD6 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Snx27Q3UHD6 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Snx27Q3UHD6 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.66□□□□□ -0.38
Snx27Q3UHD6 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Snx27Q3UHD6 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Snx27Q3UHD6 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Snx27Q3UHD6 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Snx27Q3UHD6 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Snx27Q3UHD6 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.66□□□□□ -0.38
Snx27Q3UHD6 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Snx27Q3UHD6 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC12.66□□□□□ -0.38
Snx27Q3UHD6 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Snx27Q3UHD6 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Snx27Q3UHD6 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
Snx27Q3UHD6 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Snx27Q3UHD6 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Snx27Q3UHD6 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Snx27Q3UHD6 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Snx27Q3UHD6 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.65□□□□□ -0.38
Snx27Q3UHD6 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Snx27Q3UHD6 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Snx27Q3UHD6 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Snx27Q3UHD6 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Snx27Q3UHD6 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Snx27Q3UHD6 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Snx27Q3UHD6 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Snx27Q3UHD6 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Snx27Q3UHD6 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Snx27Q3UHD6 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Snx27Q3UHD6 Gm15615-201ENSMUST00000118876 198 ntBASIC12.65□□□□□ -0.38
Snx27Q3UHD6 Gm12899-201ENSMUST00000120565 551 ntBASIC12.65□□□□□ -0.38
Snx27Q3UHD6 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC12.65□□□□□ -0.38
Snx27Q3UHD6 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Snx27Q3UHD6 Gm20495-201ENSMUST00000173902 235 ntBASIC12.65□□□□□ -0.38
Snx27Q3UHD6 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Snx27Q3UHD6 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC12.65□□□□□ -0.38
Snx27Q3UHD6 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Snx27Q3UHD6 Gm10752-201ENSMUST00000218348 729 ntBASIC12.65□□□□□ -0.38
Snx27Q3UHD6 Gm18065-201ENSMUST00000221395 526 ntBASIC12.65□□□□□ -0.38
Snx27Q3UHD6 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Snx27Q3UHD6 Gm23105-201ENSMUST00000083719 134 ntBASIC12.65□□□□□ -0.38
Snx27Q3UHD6 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Snx27Q3UHD6 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Snx27Q3UHD6 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Snx27Q3UHD6 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Snx27Q3UHD6 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Snx27Q3UHD6 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Snx27Q3UHD6 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Snx27Q3UHD6 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Snx27Q3UHD6 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Snx27Q3UHD6 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Snx27Q3UHD6 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Snx27Q3UHD6 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Snx27Q3UHD6 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Snx27Q3UHD6 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.65□□□□□ -0.39
Snx27Q3UHD6 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Snx27Q3UHD6 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.64□□□□□ -0.39
Snx27Q3UHD6 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Snx27Q3UHD6 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Snx27Q3UHD6 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Snx27Q3UHD6 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC12.64□□□□□ -0.39
Snx27Q3UHD6 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Snx27Q3UHD6 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Snx27Q3UHD6 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Snx27Q3UHD6 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC12.64□□□□□ -0.39
Snx27Q3UHD6 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Snx27Q3UHD6 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Snx27Q3UHD6 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Snx27Q3UHD6 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Snx27Q3UHD6 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.64□□□□□ -0.39
Snx27Q3UHD6 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Snx27Q3UHD6 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Snx27Q3UHD6 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Snx27Q3UHD6 Gm11500-201ENSMUST00000118237 601 ntBASIC12.64□□□□□ -0.39
Snx27Q3UHD6 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Snx27Q3UHD6 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Snx27Q3UHD6 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Snx27Q3UHD6 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC12.64□□□□□ -0.39
Snx27Q3UHD6 Gm5778-201ENSMUST00000171003 1072 ntBASIC12.64□□□□□ -0.39
Snx27Q3UHD6 Gm7741-201ENSMUST00000181445 989 ntBASIC12.64□□□□□ -0.39
Snx27Q3UHD6 Gm42657-201ENSMUST00000201746 211 ntBASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms