Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trim63Q38HM4 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trim63Q38HM4 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC9.58□□□□□ -0.88
Trim63Q38HM4 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trim63Q38HM4 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC9.58□□□□□ -0.88
Trim63Q38HM4 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
Trim63Q38HM4 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trim63Q38HM4 Gm29608-201ENSMUST00000190444 463 ntBASIC9.58□□□□□ -0.88
Trim63Q38HM4 Gm43275-201ENSMUST00000202053 1020 ntBASIC9.58□□□□□ -0.88
Trim63Q38HM4 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC9.58□□□□□ -0.88
Trim63Q38HM4 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC9.58□□□□□ -0.88
Trim63Q38HM4 AC154572.2-201ENSMUST00000225105 997 ntBASIC9.58□□□□□ -0.88
Trim63Q38HM4 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trim63Q38HM4 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trim63Q38HM4 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trim63Q38HM4 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Trim63Q38HM4 Epb41-204ENSMUST00000105970 5059 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Trim63Q38HM4 Cemip-201ENSMUST00000064174 7111 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trim63Q38HM4 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Trim63Q38HM4 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trim63Q38HM4 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trim63Q38HM4 Itgam-201ENSMUST00000064821 4682 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Trim63Q38HM4 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trim63Q38HM4 Zfp943-201ENSMUST00000055349 2741 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trim63Q38HM4 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trim63Q38HM4 Gm43660-201ENSMUST00000200956 6548 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trim63Q38HM4 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trim63Q38HM4 Kng2-201ENSMUST00000039338 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trim63Q38HM4 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC9.58□□□□□ -0.88
Trim63Q38HM4 Mov10-203ENSMUST00000106775 3584 ntTSL 5 BASIC9.58□□□□□ -0.88
Trim63Q38HM4 Mov10-206ENSMUST00000166979 3584 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trim63Q38HM4 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC9.58□□□□□ -0.88
Trim63Q38HM4 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trim63Q38HM4 BC024978-201ENSMUST00000108379 7247 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trim63Q38HM4 Adgra1-201ENSMUST00000026548 4758 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trim63Q38HM4 Anks1b-203ENSMUST00000099368 2799 ntTSL 5 BASIC9.58□□□□□ -0.88
Trim63Q38HM4 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trim63Q38HM4 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trim63Q38HM4 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trim63Q38HM4 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trim63Q38HM4 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Trim63Q38HM4 Cd300lg-202ENSMUST00000107163 2605 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trim63Q38HM4 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Trim63Q38HM4 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC9.57□□□□□ -0.88
Trim63Q38HM4 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Trim63Q38HM4 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Trim63Q38HM4 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trim63Q38HM4 Ralgps1-204ENSMUST00000113165 6192 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Trim63Q38HM4 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trim63Q38HM4 Apobr-201ENSMUST00000039522 3685 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trim63Q38HM4 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trim63Q38HM4 Ctnnd1-206ENSMUST00000111675 5089 ntTSL 5 BASIC9.57□□□□□ -0.88
Trim63Q38HM4 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trim63Q38HM4 Gm21969-201ENSMUST00000178644 4402 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Trim63Q38HM4 Nln-205ENSMUST00000224945 2486 ntBASIC9.57□□□□□ -0.88
Trim63Q38HM4 Cfap61-202ENSMUST00000118002 3230 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trim63Q38HM4 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trim63Q38HM4 AC123619.1-203ENSMUST00000225276 2757 ntBASIC9.57□□□□□ -0.88
Trim63Q38HM4 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trim63Q38HM4 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC9.57□□□□□ -0.88
Trim63Q38HM4 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC9.57□□□□□ -0.88
Trim63Q38HM4 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trim63Q38HM4 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC9.57□□□□□ -0.88
Trim63Q38HM4 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC9.57□□□□□ -0.88
Trim63Q38HM4 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC9.57□□□□□ -0.88
Trim63Q38HM4 Gm9719-201ENSMUST00000162765 543 ntBASIC9.57□□□□□ -0.88
Trim63Q38HM4 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC9.57□□□□□ -0.88
Trim63Q38HM4 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trim63Q38HM4 Mir5131-201ENSMUST00000175426 93 ntBASIC9.57□□□□□ -0.88
Trim63Q38HM4 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trim63Q38HM4 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trim63Q38HM4 Gm18905-201ENSMUST00000205454 928 ntBASIC9.57□□□□□ -0.88
Trim63Q38HM4 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC9.57□□□□□ -0.88
Trim63Q38HM4 Gm18195-201ENSMUST00000207604 706 ntBASIC9.57□□□□□ -0.88
Trim63Q38HM4 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC9.57□□□□□ -0.88
Trim63Q38HM4 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trim63Q38HM4 Gm24447-201ENSMUST00000083977 338 ntBASIC9.57□□□□□ -0.88
Trim63Q38HM4 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trim63Q38HM4 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trim63Q38HM4 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC9.57□□□□□ -0.88
Trim63Q38HM4 Brpf1-201ENSMUST00000113117 4540 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trim63Q38HM4 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trim63Q38HM4 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trim63Q38HM4 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Trim63Q38HM4 Pla2g4e-201ENSMUST00000090071 4477 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trim63Q38HM4 Rcan2-201ENSMUST00000044792 3237 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trim63Q38HM4 Cass4-201ENSMUST00000099061 3731 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trim63Q38HM4 Zfp532-208ENSMUST00000182852 5476 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Trim63Q38HM4 Slc5a9-201ENSMUST00000102719 2460 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trim63Q38HM4 Ank3-206ENSMUST00000092434 5886 ntAPPRIS P4 TSL 5 BASIC9.57□□□□□ -0.88
Trim63Q38HM4 Dido1-206ENSMUST00000103057 4906 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trim63Q38HM4 Zbtb18-201ENSMUST00000077225 4944 ntAPPRIS P3 BASIC9.57□□□□□ -0.88
Trim63Q38HM4 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Trim63Q38HM4 Oprm1-216ENSMUST00000105611 2420 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trim63Q38HM4 Dock4-204ENSMUST00000220912 7360 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trim63Q38HM4 Kcnip3-203ENSMUST00000103215 2732 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trim63Q38HM4 Kcnip3-201ENSMUST00000028850 2728 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trim63Q38HM4 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trim63Q38HM4 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trim63Q38HM4 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms