Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn6Q03958 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn6Q03958 Rps4l-202ENSMUST00000204242 789 ntBASIC11.79□□□□□ -0.52
Pfdn6Q03958 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn6Q03958 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Pfdn6Q03958 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn6Q03958 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.79□□□□□ -0.52
Pfdn6Q03958 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn6Q03958 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn6Q03958 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Pfdn6Q03958 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn6Q03958 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.79□□□□□ -0.52
Pfdn6Q03958 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn6Q03958 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn6Q03958 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Pfdn6Q03958 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.79□□□□□ -0.52
Pfdn6Q03958 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn6Q03958 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Pfdn6Q03958 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn6Q03958 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn6Q03958 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Pfdn6Q03958 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn6Q03958 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.78□□□□□ -0.52
Pfdn6Q03958 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pfdn6Q03958 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.78□□□□□ -0.52
Pfdn6Q03958 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pfdn6Q03958 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pfdn6Q03958 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pfdn6Q03958 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pfdn6Q03958 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Pfdn6Q03958 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pfdn6Q03958 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Pfdn6Q03958 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Pfdn6Q03958 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.78□□□□□ -0.52
Pfdn6Q03958 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.78□□□□□ -0.52
Pfdn6Q03958 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pfdn6Q03958 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pfdn6Q03958 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pfdn6Q03958 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pfdn6Q03958 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.78□□□□□ -0.52
Pfdn6Q03958 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pfdn6Q03958 Gm26286-201ENSMUST00000104166 134 ntBASIC11.78□□□□□ -0.52
Pfdn6Q03958 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.78□□□□□ -0.52
Pfdn6Q03958 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.78□□□□□ -0.52
Pfdn6Q03958 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.78□□□□□ -0.52
Pfdn6Q03958 Gm26047-201ENSMUST00000157308 113 ntBASIC11.78□□□□□ -0.52
Pfdn6Q03958 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Pfdn6Q03958 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Pfdn6Q03958 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pfdn6Q03958 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pfdn6Q03958 Gm29615-201ENSMUST00000185371 697 ntBASIC11.78□□□□□ -0.52
Pfdn6Q03958 Gm28224-201ENSMUST00000186078 697 ntBASIC11.78□□□□□ -0.52
Pfdn6Q03958 Gm29001-201ENSMUST00000186177 697 ntBASIC11.78□□□□□ -0.52
Pfdn6Q03958 Gm28292-201ENSMUST00000186593 697 ntBASIC11.78□□□□□ -0.52
Pfdn6Q03958 Gm28101-201ENSMUST00000187608 697 ntBASIC11.78□□□□□ -0.52
Pfdn6Q03958 Gm29076-201ENSMUST00000187689 697 ntBASIC11.78□□□□□ -0.52
Pfdn6Q03958 Gm28302-201ENSMUST00000187931 697 ntBASIC11.78□□□□□ -0.52
Pfdn6Q03958 Gm28646-201ENSMUST00000188220 697 ntBASIC11.78□□□□□ -0.52
Pfdn6Q03958 Gm28205-201ENSMUST00000189177 697 ntBASIC11.78□□□□□ -0.52
Pfdn6Q03958 Gm29032-201ENSMUST00000189797 697 ntBASIC11.78□□□□□ -0.52
Pfdn6Q03958 Gm28695-201ENSMUST00000190300 697 ntBASIC11.78□□□□□ -0.52
Pfdn6Q03958 Gm37448-201ENSMUST00000192795 697 ntBASIC11.78□□□□□ -0.52
Pfdn6Q03958 Gm43184-201ENSMUST00000197247 542 ntBASIC11.78□□□□□ -0.52
Pfdn6Q03958 Gm26047-202ENSMUST00000198840 115 ntBASIC11.78□□□□□ -0.52
Pfdn6Q03958 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.78□□□□□ -0.52
Pfdn6Q03958 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.78□□□□□ -0.52
Pfdn6Q03958 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pfdn6Q03958 Gm4157-201ENSMUST00000211647 679 ntBASIC11.78□□□□□ -0.52
Pfdn6Q03958 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.78□□□□□ -0.52
Pfdn6Q03958 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pfdn6Q03958 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pfdn6Q03958 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Pfdn6Q03958 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pfdn6Q03958 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pfdn6Q03958 Gm5705-201ENSMUST00000066241 711 ntBASIC11.78□□□□□ -0.52
Pfdn6Q03958 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pfdn6Q03958 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pfdn6Q03958 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC11.78□□□□□ -0.52
Pfdn6Q03958 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Pfdn6Q03958 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.78□□□□□ -0.52
Pfdn6Q03958 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pfdn6Q03958 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.78□□□□□ -0.52
Pfdn6Q03958 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC11.78□□□□□ -0.52
Pfdn6Q03958 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pfdn6Q03958 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pfdn6Q03958 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pfdn6Q03958 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pfdn6Q03958 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pfdn6Q03958 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Pfdn6Q03958 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pfdn6Q03958 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pfdn6Q03958 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pfdn6Q03958 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pfdn6Q03958 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Pfdn6Q03958 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Pfdn6Q03958 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.77□□□□□ -0.52
Pfdn6Q03958 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pfdn6Q03958 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Pfdn6Q03958 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pfdn6Q03958 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms