Protein–RNA interactions for Protein: Q01853

Vcp, Transitional endoplasmic reticulum ATPase, mousemouse

Known RBP Predictions only

Length 806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcpQ01853 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VcpQ01853 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
VcpQ01853 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VcpQ01853 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
VcpQ01853 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.54□□□□□ -0.4
VcpQ01853 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VcpQ01853 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VcpQ01853 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VcpQ01853 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VcpQ01853 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VcpQ01853 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
VcpQ01853 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VcpQ01853 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VcpQ01853 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VcpQ01853 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VcpQ01853 Gm23912-201ENSMUST00000104687 87 ntBASIC12.54□□□□□ -0.4
VcpQ01853 Gm13600-201ENSMUST00000117949 744 ntBASIC12.54□□□□□ -0.4
VcpQ01853 Gm12036-201ENSMUST00000120008 530 ntBASIC12.54□□□□□ -0.4
VcpQ01853 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC12.54□□□□□ -0.4
VcpQ01853 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
VcpQ01853 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VcpQ01853 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC12.54□□□□□ -0.4
VcpQ01853 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VcpQ01853 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VcpQ01853 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.54□□□□□ -0.4
VcpQ01853 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC12.54□□□□□ -0.4
VcpQ01853 Gm42682-201ENSMUST00000198349 1265 ntBASIC12.54□□□□□ -0.4
VcpQ01853 Gm42779-201ENSMUST00000198807 406 ntBASIC12.54□□□□□ -0.4
VcpQ01853 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC12.54□□□□□ -0.4
VcpQ01853 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.54□□□□□ -0.4
VcpQ01853 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.54□□□□□ -0.4
VcpQ01853 AC171241.1-201ENSMUST00000228144 1166 ntBASIC12.54□□□□□ -0.4
VcpQ01853 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VcpQ01853 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC12.54□□□□□ -0.4
VcpQ01853 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VcpQ01853 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
VcpQ01853 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VcpQ01853 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VcpQ01853 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.54□□□□□ -0.4
VcpQ01853 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VcpQ01853 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
VcpQ01853 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VcpQ01853 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.54□□□□□ -0.4
VcpQ01853 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.54□□□□□ -0.4
VcpQ01853 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.54□□□□□ -0.4
VcpQ01853 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VcpQ01853 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VcpQ01853 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.54□□□□□ -0.4
VcpQ01853 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VcpQ01853 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
VcpQ01853 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
VcpQ01853 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
VcpQ01853 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VcpQ01853 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VcpQ01853 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VcpQ01853 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VcpQ01853 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.53□□□□□ -0.4
VcpQ01853 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.53□□□□□ -0.4
VcpQ01853 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VcpQ01853 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VcpQ01853 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VcpQ01853 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VcpQ01853 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VcpQ01853 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VcpQ01853 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VcpQ01853 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VcpQ01853 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC12.53□□□□□ -0.4
VcpQ01853 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.53□□□□□ -0.4
VcpQ01853 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.53□□□□□ -0.4
VcpQ01853 Gm12899-201ENSMUST00000120565 551 ntBASIC12.53□□□□□ -0.4
VcpQ01853 Mup-ps26-201ENSMUST00000121751 202 ntBASIC12.53□□□□□ -0.4
VcpQ01853 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC12.53□□□□□ -0.4
VcpQ01853 Gm25881-201ENSMUST00000157783 103 ntBASIC12.53□□□□□ -0.4
VcpQ01853 Gm22138-201ENSMUST00000158748 128 ntBASIC12.53□□□□□ -0.4
VcpQ01853 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
VcpQ01853 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VcpQ01853 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VcpQ01853 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC12.53□□□□□ -0.4
VcpQ01853 Gm43692-201ENSMUST00000198236 1062 ntBASIC12.53□□□□□ -0.4
VcpQ01853 Gm7902-201ENSMUST00000198842 947 ntBASIC12.53□□□□□ -0.4
VcpQ01853 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VcpQ01853 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC12.53□□□□□ -0.4
VcpQ01853 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VcpQ01853 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VcpQ01853 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.53□□□□□ -0.4
VcpQ01853 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VcpQ01853 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VcpQ01853 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
VcpQ01853 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.53□□□□□ -0.4
VcpQ01853 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VcpQ01853 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VcpQ01853 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VcpQ01853 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
VcpQ01853 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
VcpQ01853 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VcpQ01853 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VcpQ01853 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.53□□□□□ -0.4
VcpQ01853 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.53□□□□□ -0.4
VcpQ01853 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VcpQ01853 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms