Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-3P97334 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Nkx2-3P97334 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-3P97334 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-3P97334 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-3P97334 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-3P97334 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Nkx2-3P97334 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-3P97334 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-3P97334 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-3P97334 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-3P97334 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Nkx2-3P97334 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-3P97334 Gm44806-201ENSMUST00000205574 2303 ntBASIC14.65□□□□□ -0.06
Nkx2-3P97334 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-3P97334 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-3P97334 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-3P97334 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Nkx2-3P97334 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-3P97334 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Nkx2-3P97334 Nudt13-207ENSMUST00000224311 1574 ntBASIC14.64□□□□□ -0.07
Nkx2-3P97334 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-3P97334 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-3P97334 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-3P97334 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-3P97334 Gm43760-201ENSMUST00000202120 3015 ntBASIC14.64□□□□□ -0.07
Nkx2-3P97334 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-3P97334 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-3P97334 Nupl1-206ENSMUST00000225111 2936 ntBASIC14.64□□□□□ -0.07
Nkx2-3P97334 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-3P97334 Gm7841-201ENSMUST00000122108 1629 ntBASIC14.64□□□□□ -0.07
Nkx2-3P97334 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-3P97334 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC14.64□□□□□ -0.07
Nkx2-3P97334 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Nkx2-3P97334 Gm11619-201ENSMUST00000117474 237 ntBASIC14.64□□□□□ -0.07
Nkx2-3P97334 Gm11560-201ENSMUST00000117567 948 ntBASIC14.64□□□□□ -0.07
Nkx2-3P97334 Gm16030-201ENSMUST00000159098 603 ntBASIC14.64□□□□□ -0.07
Nkx2-3P97334 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-3P97334 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC14.64□□□□□ -0.07
Nkx2-3P97334 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Nkx2-3P97334 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Nkx2-3P97334 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC14.64□□□□□ -0.07
Nkx2-3P97334 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-3P97334 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC14.64□□□□□ -0.07
Nkx2-3P97334 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC14.64□□□□□ -0.07
Nkx2-3P97334 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
Nkx2-3P97334 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC14.64□□□□□ -0.07
Nkx2-3P97334 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Nkx2-3P97334 Mt1-202ENSMUST00000211807 1085 ntBASIC14.64□□□□□ -0.07
Nkx2-3P97334 AC168279.1-201ENSMUST00000214611 382 ntBASIC14.64□□□□□ -0.07
Nkx2-3P97334 Gm18515-201ENSMUST00000219755 797 ntBASIC14.64□□□□□ -0.07
Nkx2-3P97334 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-3P97334 Gemin6-201ENSMUST00000069486 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-3P97334 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Nkx2-3P97334 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-3P97334 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
Nkx2-3P97334 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC14.64□□□□□ -0.07
Nkx2-3P97334 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Nkx2-3P97334 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-3P97334 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-3P97334 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-3P97334 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-3P97334 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Nkx2-3P97334 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-3P97334 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-3P97334 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Nkx2-3P97334 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-3P97334 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-3P97334 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-3P97334 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-3P97334 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.63□□□□□ -0.07
Nkx2-3P97334 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-3P97334 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Nkx2-3P97334 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Nkx2-3P97334 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC14.63□□□□□ -0.07
Nkx2-3P97334 Gm25343-201ENSMUST00000157460 107 ntBASIC14.63□□□□□ -0.07
Nkx2-3P97334 Gm4895-201ENSMUST00000181646 1137 ntBASIC14.63□□□□□ -0.07
Nkx2-3P97334 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC14.63□□□□□ -0.07
Nkx2-3P97334 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC14.63□□□□□ -0.07
Nkx2-3P97334 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC14.63□□□□□ -0.07
Nkx2-3P97334 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-3P97334 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-3P97334 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Nkx2-3P97334 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-3P97334 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-3P97334 Gm18798-201ENSMUST00000187264 1700 ntBASIC14.63□□□□□ -0.07
Nkx2-3P97334 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC14.63□□□□□ -0.07
Nkx2-3P97334 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-3P97334 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-3P97334 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC14.63□□□□□ -0.07
Nkx2-3P97334 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-3P97334 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC14.63□□□□□ -0.07
Nkx2-3P97334 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-3P97334 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-3P97334 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-3P97334 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Nkx2-3P97334 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
Nkx2-3P97334 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-3P97334 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-3P97334 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms