Protein–RNA interactions for Protein: P82976

Gbx1, Homeobox protein GBX-1, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gbx1P82976 Gm26286-201ENSMUST00000104166 134 ntBASIC11.01□□□□□ -0.65
Gbx1P82976 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Gbx1P82976 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.01□□□□□ -0.65
Gbx1P82976 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gbx1P82976 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gbx1P82976 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gbx1P82976 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC11.01□□□□□ -0.65
Gbx1P82976 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gbx1P82976 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Gbx1P82976 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Gbx1P82976 AC132446.1-201ENSMUST00000222655 226 ntBASIC11.01□□□□□ -0.65
Gbx1P82976 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.01□□□□□ -0.65
Gbx1P82976 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gbx1P82976 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Gbx1P82976 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC11.01□□□□□ -0.65
Gbx1P82976 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.01□□□□□ -0.65
Gbx1P82976 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gbx1P82976 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gbx1P82976 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gbx1P82976 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Gbx1P82976 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gbx1P82976 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gbx1P82976 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Gbx1P82976 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gbx1P82976 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Gbx1P82976 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gbx1P82976 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Gbx1P82976 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gbx1P82976 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Gbx1P82976 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Gbx1P82976 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Gbx1P82976 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Gbx1P82976 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Gbx1P82976 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Gbx1P82976 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Gbx1P82976 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Gbx1P82976 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Gbx1P82976 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11□□□□□ -0.65
Gbx1P82976 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Gbx1P82976 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
Gbx1P82976 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11□□□□□ -0.65
Gbx1P82976 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Gbx1P82976 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Gbx1P82976 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11□□□□□ -0.65
Gbx1P82976 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11□□□□□ -0.65
Gbx1P82976 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Gbx1P82976 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11□□□□□ -0.65
Gbx1P82976 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Gbx1P82976 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC11□□□□□ -0.65
Gbx1P82976 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11□□□□□ -0.65
Gbx1P82976 Gm12962-202ENSMUST00000144212 691 ntTSL 2 BASIC11□□□□□ -0.65
Gbx1P82976 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Gbx1P82976 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Gbx1P82976 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11□□□□□ -0.65
Gbx1P82976 AA914427-201ENSMUST00000193194 1166 ntBASIC11□□□□□ -0.65
Gbx1P82976 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC11□□□□□ -0.65
Gbx1P82976 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11□□□□□ -0.65
Gbx1P82976 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Gbx1P82976 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC11□□□□□ -0.65
Gbx1P82976 Gm17383-201ENSMUST00000078739 1041 ntBASIC11□□□□□ -0.65
Gbx1P82976 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11□□□□□ -0.65
Gbx1P82976 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Gbx1P82976 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC11□□□□□ -0.65
Gbx1P82976 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Gbx1P82976 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Gbx1P82976 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC11□□□□□ -0.65
Gbx1P82976 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Gbx1P82976 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Gbx1P82976 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Gbx1P82976 Gm44755-201ENSMUST00000207830 2102 ntBASIC11□□□□□ -0.65
Gbx1P82976 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Gbx1P82976 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Gbx1P82976 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Gbx1P82976 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Gbx1P82976 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11□□□□□ -0.65
Gbx1P82976 Gm42853-201ENSMUST00000201273 1387 ntBASIC11□□□□□ -0.65
Gbx1P82976 Gm28719-201ENSMUST00000187779 1757 ntBASIC11□□□□□ -0.65
Gbx1P82976 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Gbx1P82976 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Gbx1P82976 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Gbx1P82976 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Gbx1P82976 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Gbx1P82976 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Gbx1P82976 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Gbx1P82976 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Gbx1P82976 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Gbx1P82976 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC10.99□□□□□ -0.65
Gbx1P82976 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Gbx1P82976 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Gbx1P82976 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Gbx1P82976 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC10.99□□□□□ -0.65
Gbx1P82976 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Gbx1P82976 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Gbx1P82976 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Gbx1P82976 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Gbx1P82976 Gm24255-201ENSMUST00000104481 128 ntBASIC10.99□□□□□ -0.65
Gbx1P82976 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Gbx1P82976 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC10.99□□□□□ -0.65
Gbx1P82976 Gm23958-201ENSMUST00000157207 105 ntBASIC10.99□□□□□ -0.65
Gbx1P82976 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms