Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Gm7848-201ENSMUST00000210739 718 ntBASIC10.5□□□□□ -0.73
SgcbP82349 AC113082.1-201ENSMUST00000217324 327 ntBASIC10.5□□□□□ -0.73
SgcbP82349 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC10.5□□□□□ -0.73
SgcbP82349 Abhd11os-203ENSMUST00000222613 363 ntBASIC10.5□□□□□ -0.73
SgcbP82349 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
SgcbP82349 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SgcbP82349 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC10.5□□□□□ -0.73
SgcbP82349 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
SgcbP82349 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
SgcbP82349 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SgcbP82349 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC10.5□□□□□ -0.73
SgcbP82349 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SgcbP82349 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
SgcbP82349 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SgcbP82349 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
SgcbP82349 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SgcbP82349 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
SgcbP82349 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
SgcbP82349 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC10.5□□□□□ -0.73
SgcbP82349 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SgcbP82349 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
SgcbP82349 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SgcbP82349 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SgcbP82349 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
SgcbP82349 Gm43267-201ENSMUST00000199664 1796 ntBASIC10.49□□□□□ -0.73
SgcbP82349 Gm43807-201ENSMUST00000200678 1781 ntBASIC10.49□□□□□ -0.73
SgcbP82349 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SgcbP82349 AC154517.2-201ENSMUST00000220829 2458 ntBASIC10.49□□□□□ -0.73
SgcbP82349 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
SgcbP82349 Astn1-205ENSMUST00000193042 7248 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
SgcbP82349 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SgcbP82349 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC10.49□□□□□ -0.73
SgcbP82349 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
SgcbP82349 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SgcbP82349 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC10.49□□□□□ -0.73
SgcbP82349 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
SgcbP82349 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
SgcbP82349 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC10.49□□□□□ -0.73
SgcbP82349 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
SgcbP82349 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
SgcbP82349 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SgcbP82349 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
SgcbP82349 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SgcbP82349 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
SgcbP82349 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SgcbP82349 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SgcbP82349 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SgcbP82349 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC10.49□□□□□ -0.73
SgcbP82349 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC10.49□□□□□ -0.73
SgcbP82349 Gm13035-201ENSMUST00000117496 342 ntBASIC10.49□□□□□ -0.73
SgcbP82349 Gm8566-201ENSMUST00000120174 465 ntBASIC10.49□□□□□ -0.73
SgcbP82349 Gm12566-201ENSMUST00000121479 359 ntBASIC10.49□□□□□ -0.73
SgcbP82349 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SgcbP82349 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
SgcbP82349 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
SgcbP82349 Cd63-ps-202ENSMUST00000154992 717 ntBASIC10.49□□□□□ -0.73
SgcbP82349 Gm6548-201ENSMUST00000167498 1165 ntBASIC10.49□□□□□ -0.73
SgcbP82349 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC10.49□□□□□ -0.73
SgcbP82349 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
SgcbP82349 Gm6114-201ENSMUST00000182472 968 ntBASIC10.49□□□□□ -0.73
SgcbP82349 Gm4482-201ENSMUST00000200876 742 ntBASIC10.49□□□□□ -0.73
SgcbP82349 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC10.49□□□□□ -0.73
SgcbP82349 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SgcbP82349 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
SgcbP82349 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
SgcbP82349 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
SgcbP82349 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
SgcbP82349 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
SgcbP82349 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
SgcbP82349 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SgcbP82349 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
SgcbP82349 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SgcbP82349 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SgcbP82349 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
SgcbP82349 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SgcbP82349 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC10.49□□□□□ -0.73
SgcbP82349 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SgcbP82349 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SgcbP82349 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC10.49□□□□□ -0.73
SgcbP82349 AC108858.2-201ENSMUST00000228186 1425 ntBASIC10.49□□□□□ -0.73
SgcbP82349 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SgcbP82349 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC10.49□□□□□ -0.73
SgcbP82349 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC10.49□□□□□ -0.73
SgcbP82349 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
SgcbP82349 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SgcbP82349 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SgcbP82349 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
SgcbP82349 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC10.48□□□□□ -0.73
SgcbP82349 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
SgcbP82349 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SgcbP82349 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SgcbP82349 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SgcbP82349 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SgcbP82349 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SgcbP82349 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
SgcbP82349 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
SgcbP82349 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SgcbP82349 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
SgcbP82349 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SgcbP82349 Gm45428-201ENSMUST00000209619 1789 ntBASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms